otbVectorDataToLabelImageFilter.hxx

Go to the documentation of this file.

/*
 * Copyright (C) 2005-2022 Centre National d'Etudes Spatiales (CNES)
 *
 * This file is part of Orfeo Toolbox
 *
 *     https://www.orfeo-toolbox.org/
 *
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 *
 *     http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */
 
#ifndef otbVectorDataToLabelImageFilter_hxx
#define otbVectorDataToLabelImageFilter_hxx
 
#include "gdal_alg.h"
#include "ogr_srs_api.h"
 
#include "otbVectorDataToLabelImageFilter.h"
#include "otbOGRIOHelper.h"
#include "otbGdalDataTypeBridge.h"
#include "otbImage.h"
 
namespace otb
{
template <class TVectorData, class TOutputImage>
VectorDataToLabelImageFilter<TVectorData, TOutputImage>::VectorDataToLabelImageFilter()
  : m_OGRDataSourcePointer(nullptr), m_BandsToBurn(1, 1), m_BurnAttribute("FID"), m_DefaultBurnValue(1.), m_BackgroundValue(0.), m_AllTouchedMode(false)
{
  this->SetNumberOfRequiredInputs(1);
 
  // Output parameters initialization
  m_OutputSpacing.Fill(1.0);
  m_OutputSize.Fill(0);
  m_OutputStartIndex.Fill(0);
}
 
template <class TVectorData, class TOutputImage>
void VectorDataToLabelImageFilter<TVectorData, TOutputImage>::AddVectorData(const VectorDataType* vd)
{
  this->itk::ProcessObject::PushBackInput(vd);
}
 
template <class TVectorData, class TOutputImage>
const typename VectorDataToLabelImageFilter<TVectorData, TOutputImage>::VectorDataType*
VectorDataToLabelImageFilter<TVectorData, TOutputImage>::GetInput(unsigned int idx)
{
  return static_cast<const TVectorData*>(this->itk::ProcessObject::GetInput(idx));
}
 
template <class TVectorData, class TOutputImage>
void VectorDataToLabelImageFilter<TVectorData, TOutputImage>::SetOutputSpacing(const OutputSpacingType& spacing)
{
  if (this->m_OutputSpacing != spacing)
  {
    this->m_OutputSpacing = spacing;
    this->Modified();
  }
}
 
template <class TVectorData, class TOutputImage>
void VectorDataToLabelImageFilter<TVectorData, TOutputImage>::SetOutputSpacing(const double spacing[2])
{
  OutputSpacingType s(spacing);
  this->SetOutputSpacing(s);
}
 
template <class TVectorData, class TOutputImage>
void VectorDataToLabelImageFilter<TVectorData, TOutputImage>::SetOutputSpacing(const float spacing[2])
{
  itk::Vector<float, 2> sf(spacing);
  OutputSpacingType s;
  s.CastFrom(sf);
  this->SetOutputSpacing(s);
}
 
template <class TVectorData, class TOutputImage>
void VectorDataToLabelImageFilter<TVectorData, TOutputImage>::SetOutputOrigin(const double origin[2])
{
  OutputOriginType p(origin);
  this->SetOutputOrigin(p);
}
 
template <class TVectorData, class TOutputImage>
void VectorDataToLabelImageFilter<TVectorData, TOutputImage>::SetOutputOrigin(const float origin[2])
{
  itk::Point<float, 2> of(origin);
  OutputOriginType p;
  p.CastFrom(of);
  this->SetOutputOrigin(p);
}
 
template <class TVectorData, class TOutputImage>
template <class ImagePointerType>
void VectorDataToLabelImageFilter<TVectorData, TOutputImage>::SetOutputParametersFromImage(const ImagePointerType src)
{
  this->SetOutputOrigin(src->GetOrigin());
  this->SetOutputSpacing(src->GetSignedSpacing());
  this->SetOutputSize(src->GetLargestPossibleRegion().GetSize());
  this->SetOutputProjectionRef(src->GetProjectionRef());
}
 
template <class TVectorData, class TOutputImage>
void VectorDataToLabelImageFilter<TVectorData, TOutputImage>::GenerateOutputInformation()
{
  // get pointer to the output
  OutputImagePointer outputPtr = this->GetOutput();
  if (!outputPtr)
  {
    return;
  }
 
  // Set the size of the output region
  typename TOutputImage::RegionType outputLargestPossibleRegion;
  outputLargestPossibleRegion.SetSize(m_OutputSize);
  // outputLargestPossibleRegion.SetIndex(m_OutputStartIndex);
  outputPtr->SetLargestPossibleRegion(outputLargestPossibleRegion);
 
  // Set spacing and origin
  outputPtr->SetSignedSpacing(m_OutputSpacing);
  outputPtr->SetOrigin(m_OutputOrigin);
 
  itk::MetaDataDictionary& dict = outputPtr->GetMetaDataDictionary();
  itk::EncapsulateMetaData<std::string>(dict, MetaDataKey::ProjectionRefKey, static_cast<std::string>(this->GetOutputProjectionRef()));
 
  // Generate the OGRLayers from the input VectorDatas
  // iteration begin from 1 cause the 0th input is a image
  for (unsigned int idx = 0; idx < this->GetNumberOfInputs(); ++idx)
  {
    const VectorDataType* vd = dynamic_cast<const VectorDataType*>(this->itk::ProcessObject::GetInput(idx));
 
    // Get the projection ref of the current VectorData
    std::string          projectionRefWkt               = vd->GetProjectionRef();
    bool                 projectionInformationAvailable = !projectionRefWkt.empty();
    OGRSpatialReference* oSRS                           = nullptr;
 
    if (projectionInformationAvailable)
    {
      oSRS = static_cast<OGRSpatialReference*>(OSRNewSpatialReference(projectionRefWkt.c_str()));
    }
    else
    {
      otbMsgDevMacro(<< "Projection information unavailable");
    }
 
    // Retrieving root node
    DataTreeConstPointerType tree = vd->GetDataTree();
 
    // Get the input tree root
    InternalTreeNodeType* inputRoot = const_cast<InternalTreeNodeType*>(tree->GetRoot());
 
    // Iterative method to build the layers from a VectorData
    OGRLayer*                 ogrCurrentLayer = nullptr;
    std::vector<OGRLayer*>    ogrLayerVector;
    otb::OGRIOHelper::Pointer IOConversion = otb::OGRIOHelper::New();
 
    // The method ConvertDataTreeNodeToOGRLayers create the
    // OGRDataSource but don t release it. Destruction is done in the
    // destructor
    m_OGRDataSourcePointer = nullptr;
    ogrLayerVector         = IOConversion->ConvertDataTreeNodeToOGRLayers(inputRoot, m_OGRDataSourcePointer, ogrCurrentLayer, oSRS);
 
    // From OGRLayer* to OGRGeometryH vector
    for (unsigned int idx2 = 0; idx2 < ogrLayerVector.size(); ++idx2)
    {
      // test if the layers contain a field m_BurnField;
      int burnField = -1;
 
      if (!m_BurnAttribute.empty())
      {
        burnField = OGR_FD_GetFieldIndex(OGR_L_GetLayerDefn((OGRLayerH)(ogrLayerVector[idx2])), m_BurnAttribute.c_str());
 
        // Get the geometries of the layer
        OGRFeatureH hFeat;
        OGR_L_ResetReading((OGRLayerH)(ogrLayerVector[idx2]));
        while ((hFeat = OGR_L_GetNextFeature((OGRLayerH)(ogrLayerVector[idx2]))) != nullptr)
        {
          OGRGeometryH hGeom;
          if (OGR_F_GetGeometryRef(hFeat) == nullptr)
          {
            OGR_F_Destroy(hFeat);
            continue;
          }
 
          hGeom = OGR_G_Clone(OGR_F_GetGeometryRef(hFeat));
          m_SrcDataSetGeometries.push_back(hGeom);
 
          if (burnField == -1)
          {
            // TODO : if no burnAttribute available, warning or raise an exception??
            m_FullBurnValues.push_back(m_DefaultBurnValue++);
            itkWarningMacro(<< "Failed to find attribute " << m_BurnAttribute << " in layer "
                            << OGR_FD_GetName(OGR_L_GetLayerDefn((OGRLayerH)(ogrLayerVector[idx2])))
                            << " .Setting burn value to default =  " << m_DefaultBurnValue);
          }
          else
          {
            m_FullBurnValues.push_back(OGR_F_GetFieldAsDouble(hFeat, burnField));
          }
 
          OGR_F_Destroy(hFeat);
        }
      }
 
      // Destroy the oSRS
      if (oSRS != nullptr)
      {
        OSRRelease(oSRS);
      }
    }
  }
}
 
template <class TVectorData, class TOutputImage>
void VectorDataToLabelImageFilter<TVectorData, TOutputImage>::GenerateData()
{
  // Call Superclass GenerateData
  this->AllocateOutputs();
 
  // Get the buffered region
  OutputImageRegionType bufferedRegion = this->GetOutput()->GetBufferedRegion();
 
  // Fill the buffer with the background value
  this->GetOutput()->FillBuffer(m_BackgroundValue);
 
  // nb bands
  unsigned int nbBands = this->GetOutput()->GetNumberOfComponentsPerPixel();
 
  // register drivers
  GDALAllRegister();
 
  std::ostringstream stream;
  stream << "MEM:::"
         << "DATAPOINTER=" << (uintptr_t)(this->GetOutput()->GetBufferPointer()) << ","
         << "PIXELS=" << bufferedRegion.GetSize()[0] << ","
         << "LINES=" << bufferedRegion.GetSize()[1] << ","
         << "BANDS=" << nbBands << ","
         << "DATATYPE=" << GDALGetDataTypeName(GdalDataTypeBridge::GetGDALDataType<OutputImageInternalPixelType>()) << ","
         << "PIXELOFFSET=" << sizeof(OutputImageInternalPixelType) * nbBands << ","
         << "LINEOFFSET=" << sizeof(OutputImageInternalPixelType) * nbBands * bufferedRegion.GetSize()[0] << ","
         << "BANDOFFSET=" << sizeof(OutputImageInternalPixelType);
 
  GDALDatasetH dataset = GDALOpen(stream.str().c_str(), GA_Update);
 
  // Add the projection ref to the dataset
  GDALSetProjection(dataset, this->GetOutput()->GetProjectionRef().c_str());
 
  // add the geoTransform to the dataset
  itk::VariableLengthVector<double> geoTransform(6);
 
  // Reporting origin and spacing of the buffered region
  // the spacing is unchanged, the origin is relative to the buffered region
  OutputIndexType  bufferIndexOrigin = bufferedRegion.GetIndex();
  OutputOriginType bufferOrigin;
  this->GetOutput()->TransformIndexToPhysicalPoint(bufferIndexOrigin, bufferOrigin);
  geoTransform[0] = bufferOrigin[0] - 0.5 * this->GetOutput()->GetSignedSpacing()[0];
  geoTransform[3] = bufferOrigin[1] - 0.5 * this->GetOutput()->GetSignedSpacing()[1];
  geoTransform[1] = this->GetOutput()->GetSignedSpacing()[0];
  geoTransform[5] = this->GetOutput()->GetSignedSpacing()[1];
 
  // FIXME: Here component 1 and 4 should be replaced by the orientation parameters
  geoTransform[2] = 0.;
  geoTransform[4] = 0.;
  GDALSetGeoTransform(dataset, const_cast<double*>(geoTransform.GetDataPointer()));
 
  char** options = nullptr;
  if (m_AllTouchedMode)
  {
    options = CSLSetNameValue(options, "ALL_TOUCHED", "TRUE");
  }
 
  // Burn the geometries into the dataset
  if (dataset != nullptr)
  {
    GDALRasterizeGeometries(dataset, m_BandsToBurn.size(), &(m_BandsToBurn[0]), m_SrcDataSetGeometries.size(), &(m_SrcDataSetGeometries[0]), nullptr, nullptr,
                            &(m_FullBurnValues[0]), options, GDALDummyProgress, nullptr);
 
    CSLDestroy(options);
 
    // release the dataset
    GDALClose(dataset);
  }
}
 
template <class TVectorData, class TOutputImage>
void VectorDataToLabelImageFilter<TVectorData, TOutputImage>::PrintSelf(std::ostream& os, itk::Indent indent) const
{
  Superclass::PrintSelf(os, indent);
}
 
} // end namespace otb
 
#endif