otbKMeansAttributesLabelMapFilter.h

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/*
 * Copyright (C) 2005-2022 Centre National d'Etudes Spatiales (CNES)
 *
 * This file is part of Orfeo Toolbox
 *
 *     https://www.orfeo-toolbox.org/
 *
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 *
 *     http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */
 
#ifndef otbKMeansAttributesLabelMapFilter_h
#define otbKMeansAttributesLabelMapFilter_h
 
#include "itkLabelMapFilter.h"
#include "otbLabelMapWithClassLabelToLabeledSampleListFilter.h"
#include "itkListSample.h"
#include "itkWeightedCentroidKdTreeGenerator.h"
#include "itkKdTreeBasedKmeansEstimator.h"
 
namespace otb
{
 
template <class TInputImage>
class ITK_EXPORT KMeansAttributesLabelMapFilter : public itk::Object
{
public:
  typedef KMeansAttributesLabelMapFilter Self;
  typedef itk::LabelMapFilter<TInputImage, TInputImage> Superclass;
  typedef itk::SmartPointer<Self>       Pointer;
  typedef itk::SmartPointer<const Self> ConstPointer;
 
  typedef TInputImage                              InputImageType;
  typedef typename InputImageType::Pointer         InputImagePointer;
  typedef typename InputImageType::ConstPointer    InputImageConstPointer;
  typedef typename InputImageType::RegionType      InputImageRegionType;
  typedef typename InputImageType::PixelType       InputImagePixelType;
  typedef typename InputImageType::LabelObjectType LabelObjectType;
  typedef itk::DataObject                          DataObjectType;
  typedef DataObjectType::Pointer                  DataObjectPointerType;
 
  // LabelObject attributes
  typedef typename LabelObjectType::AttributesValueType AttributesValueType;
  typedef typename LabelObjectType::ClassLabelType      ClassLabelType;
 
  // LabelMapToSampleList
  typedef itk::VariableLengthVector<AttributesValueType> VectorType;
  typedef itk::FixedArray<ClassLabelType, 1> ClassLabelVectorType;
 
  typedef itk::Statistics::ListSample<VectorType>           ListSampleType;
  typedef itk::Statistics::ListSample<ClassLabelVectorType> TrainingListSampleType;
  typedef otb::LabelMapWithClassLabelToLabeledSampleListFilter<InputImageType, ListSampleType, TrainingListSampleType> LabelMapToSampleListFilterType;
  typedef typename LabelMapToSampleListFilterType::MeasurementFunctorType MeasurementFunctorType;
 
  // KMeans
  typedef itk::Statistics::WeightedCentroidKdTreeGenerator<ListSampleType> TreeGeneratorType;
  typedef typename TreeGeneratorType::KdTreeType                           TreeType;
  typedef itk::Statistics::KdTreeBasedKmeansEstimator<TreeType>            EstimatorType;
  typedef itk::Statistics::EuclideanDistanceMetric<VectorType>             DistanceType;
  typedef std::vector<VectorType>                                          CentroidsVectorType;
 
  itkStaticConstMacro(InputImageDimension, unsigned int, TInputImage::ImageDimension);
 
  itkNewMacro(Self);
 
  itkTypeMacro(KMeansAttributesLabelMapFilter, itk::Object);
 
  CentroidsVectorType& GetCentroids()
  {
    return m_Centroids;
  }
  const CentroidsVectorType& GetCentroids() const
  {
    return m_Centroids;
  }
 
  itkSetObjectMacro(InputLabelMap, InputImageType);
  itkGetObjectMacro(InputLabelMap, InputImageType);
 
  itkSetMacro(NumberOfClasses, unsigned int);
  itkGetMacro(NumberOfClasses, unsigned int);
 
  MeasurementFunctorType& GetMeasurementFunctor()
  {
    return m_LabelMapToSampleListFilter->GetMeasurementFunctor();
  }
 
  void SetMeasurementFunctor(MeasurementFunctorType& functor)
  {
    m_LabelMapToSampleListFilter->SetMeasurementFunctor(functor);
  }
 
  void Compute();
 
protected:
  KMeansAttributesLabelMapFilter();
  ~KMeansAttributesLabelMapFilter() override{};
 
 
private:
  KMeansAttributesLabelMapFilter(const Self&) = delete;
  void operator=(const Self&) = delete;
 
  InputImagePointer   m_InputLabelMap;
  CentroidsVectorType m_Centroids;
 
  typename LabelMapToSampleListFilterType::Pointer m_LabelMapToSampleListFilter;
  unsigned int                                     m_NumberOfClasses;
 
}; // end of class
 
} // end namespace otb
 
#ifndef OTB_MANUAL_INSTANTIATION
#include "otbKMeansAttributesLabelMapFilter.hxx"
#endif
 
#endif