otbBandMathImageFilter.hxx

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/*
 * Copyright (C) 1999-2011 Insight Software Consortium
 * Copyright (C) 2005-2022 Centre National d'Etudes Spatiales (CNES)
 *
 * This file is part of Orfeo Toolbox
 *
 *     https://www.orfeo-toolbox.org/
 *
 * Licensed under the Apache License, Version 2.0 (the "License");
 * you may not use this file except in compliance with the License.
 * You may obtain a copy of the License at
 *
 *     http://www.apache.org/licenses/LICENSE-2.0
 *
 * Unless required by applicable law or agreed to in writing, software
 * distributed under the License is distributed on an "AS IS" BASIS,
 * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 * See the License for the specific language governing permissions and
 * limitations under the License.
 */
 
#ifndef otbBandMathImageFilter_hxx
#define otbBandMathImageFilter_hxx
#include "otbBandMathImageFilter.h"
 
#include "itkImageRegionIterator.h"
#include "itkNumericTraits.h"
#include "itkProgressReporter.h"
#include "otbMacro.h"
 
 
#include <iostream>
#include <string>
 
namespace otb
{
 
template <class TImage>
BandMathImageFilter<TImage>::BandMathImageFilter()
{
  // This number will be incremented each time an image
  // is added over the one minimumrequired
  this->SetNumberOfRequiredInputs(1);
  this->InPlaceOff();
 
  m_UnderflowCount = 0;
  m_OverflowCount  = 0;
  m_ThreadUnderflow.SetSize(1);
  m_ThreadOverflow.SetSize(1);
}
 
template <class TImage>
BandMathImageFilter<TImage>::~BandMathImageFilter()
{
}
 
template <class TImage>
void BandMathImageFilter<TImage>::PrintSelf(std::ostream& os, itk::Indent indent) const
{
  Superclass::PrintSelf(os, indent);
 
  os << indent << "Expression: " << m_Expression << std::endl;
  os << indent << "Computed values follow:" << std::endl;
  os << indent << "UnderflowCount: " << m_UnderflowCount << std::endl;
  os << indent << "OverflowCount: " << m_OverflowCount << std::endl;
  os << indent << "itk::NumericTraits<PixelType>::NonpositiveMin()  :  " << itk::NumericTraits<PixelType>::NonpositiveMin() << std::endl;
  os << indent << "itk::NumericTraits<PixelType>::max()  :             " << itk::NumericTraits<PixelType>::max() << std::endl;
}
 
template <class TImage>
void BandMathImageFilter<TImage>::SetNthInput(DataObjectPointerArraySizeType idx, const ImageType* image)
{
  this->SetInput(idx, const_cast<TImage*>(image));
  DataObjectPointerArraySizeType nbInput = this->GetNumberOfInputs();
  m_VVarName.resize(nbInput + 4);
  std::ostringstream varName;
  varName << "b" << nbInput;
  m_VVarName[idx] = varName.str();
 
  m_VVarName[idx + 1] = "idxX";
  m_VVarName[idx + 2] = "idxY";
  m_VVarName[idx + 3] = "idxPhyX";
  m_VVarName[idx + 4] = "idxPhyY";
}
 
template <class TImage>
void BandMathImageFilter<TImage>::SetNthInput(DataObjectPointerArraySizeType idx, const ImageType* image, const std::string& varName)
{
  this->SetInput(idx, const_cast<TImage*>(image));
  m_VVarName.resize(this->GetNumberOfInputs() + 4);
  m_VVarName[idx] = varName;
 
  m_VVarName[idx + 1] = "idxX";
  m_VVarName[idx + 2] = "idxY";
  m_VVarName[idx + 3] = "idxPhyX";
  m_VVarName[idx + 4] = "idxPhyY";
}
 
template <class TImage>
void BandMathImageFilter<TImage>::SetNthInputName(DataObjectPointerArraySizeType idx, const std::string& varName)
{
  m_VVarName[idx] = varName;
}
 
template <typename TImage>
TImage* BandMathImageFilter<TImage>::GetNthInput(DataObjectPointerArraySizeType idx)
{
  return const_cast<TImage*>(this->GetInput(idx));
}
 
template <typename TImage>
void BandMathImageFilter<TImage>::SetExpression(const std::string& expression)
{
  if (m_Expression != expression)
    m_Expression = expression;
  this->Modified();
}
 
template <typename TImage>
std::string BandMathImageFilter<TImage>::GetExpression() const
{
  return m_Expression;
}
 
template <typename TImage>
std::string BandMathImageFilter<TImage>::GetNthInputName(DataObjectPointerArraySizeType idx) const
{
  return m_VVarName.at(idx);
}
 
template <typename TImage>
void BandMathImageFilter<TImage>::BeforeThreadedGenerateData()
{
  typename std::vector<ParserType::Pointer>::iterator itParser;
  unsigned int                                        nbThreads     = this->GetNumberOfThreads();
  unsigned int                                        nbInputImages = this->GetNumberOfInputs();
  unsigned int                                        nbAccessIndex = 4; // to give access to image and physical index
  unsigned int                                        i, j;
  unsigned int                                        inputSize[2];
  std::vector<std::string>                            tmpIdxVarNames;
 
  tmpIdxVarNames.resize(nbAccessIndex);
 
  tmpIdxVarNames.resize(nbAccessIndex);
  tmpIdxVarNames[0] = "idxX";
  tmpIdxVarNames[1] = "idxY";
  tmpIdxVarNames[2] = "idxPhyX";
  tmpIdxVarNames[3] = "idxPhyY";
 
  // Check if input image dimensions matches
  inputSize[0] = this->GetNthInput(0)->GetLargestPossibleRegion().GetSize(0);
  inputSize[1] = this->GetNthInput(0)->GetLargestPossibleRegion().GetSize(1);
 
  for (unsigned int p = 1; p < nbInputImages; p++)
  {
    if ((inputSize[0] != this->GetNthInput(p)->GetLargestPossibleRegion().GetSize(0)) ||
        (inputSize[1] != this->GetNthInput(p)->GetLargestPossibleRegion().GetSize(1)))
    {
      itkExceptionMacro(<< "Input images must have the same dimensions." << std::endl
                        << "band #1 is [" << inputSize[0] << ";" << inputSize[1] << "]" << std::endl
                        << "band #" << p + 1 << " is [" << this->GetNthInput(p)->GetLargestPossibleRegion().GetSize(0) << ";"
                        << this->GetNthInput(p)->GetLargestPossibleRegion().GetSize(1) << "]");
    }
  }
 
  // Store images specs
  m_Spacing = this->GetNthInput(0)->GetSignedSpacing();
  m_Origin  = this->GetNthInput(0)->GetOrigin();
 
  // Allocate and initialize the thread temporaries
  m_ThreadUnderflow.SetSize(nbThreads);
  m_ThreadUnderflow.Fill(0);
  m_ThreadOverflow.SetSize(nbThreads);
  m_ThreadOverflow.Fill(0);
  m_VParser.resize(nbThreads);
  m_AImage.resize(nbThreads);
  m_NbVar = nbInputImages + nbAccessIndex;
  m_VVarName.resize(m_NbVar);
 
  for (itParser = m_VParser.begin(); itParser < m_VParser.end(); itParser++)
  {
    *itParser = ParserType::New();
  }
 
  for (i = 0; i < nbThreads; ++i)
  {
    m_AImage[i].resize(m_NbVar);
    m_VParser[i]->SetExpr(m_Expression);
 
    for (j = 0; j < nbInputImages; ++j)
    {
      m_VParser[i]->DefineVar(m_VVarName[j], &(m_AImage[i][j]));
    }
 
    for (j = nbInputImages; j < nbInputImages + nbAccessIndex; ++j)
    {
      m_VVarName[j] = tmpIdxVarNames[j - nbInputImages];
      m_VParser[i]->DefineVar(m_VVarName[j], &(m_AImage[i][j]));
    }
  }
}
 
template <typename TImage>
void BandMathImageFilter<TImage>::AfterThreadedGenerateData()
{
  unsigned int nbThreads = this->GetNumberOfThreads();
  unsigned int i;
 
  m_UnderflowCount = 0;
  m_OverflowCount  = 0;
 
  // Accumulate counts for each thread
  for (i = 0; i < nbThreads; ++i)
  {
    m_UnderflowCount += m_ThreadUnderflow[i];
    m_OverflowCount += m_ThreadOverflow[i];
  }
 
  if ((m_UnderflowCount != 0) || (m_OverflowCount != 0))
    otbWarningMacro(<< std::endl
                    << "The Following Parsed Expression  :  " << this->GetExpression() << std::endl
                    << "Generated " << m_UnderflowCount << " Underflow(s) "
                    << "And " << m_OverflowCount << " Overflow(s) " << std::endl
                    << "The Parsed Expression, The Inputs And The Output "
                    << "Type May Be Incompatible !");
}
 
template <typename TImage>
void BandMathImageFilter<TImage>::ThreadedGenerateData(const ImageRegionType& outputRegionForThread, itk::ThreadIdType threadId)
{
  double       value;
  unsigned int j;
  unsigned int nbInputImages = this->GetNumberOfInputs();
 
  typedef itk::ImageRegionConstIterator<TImage> ImageRegionConstIteratorType;
 
  assert(nbInputImages);
  std::vector<ImageRegionConstIteratorType> Vit(nbInputImages);
 
  for (j = 0; j < nbInputImages; ++j)
  {
    Vit[j] = ImageRegionConstIteratorType(this->GetNthInput(j), outputRegionForThread);
  }
 
  itk::ImageRegionIterator<TImage> ot(this->GetOutput(), outputRegionForThread);
 
  // support progress methods/callbacks
  itk::ProgressReporter progress(this, threadId, outputRegionForThread.GetNumberOfPixels());
 
  std::vector<double>&          threadImage      = m_AImage[threadId];
  ParserType::Pointer const&    threadParser     = m_VParser[threadId];
  long&                         threadUnderflow  = m_ThreadUnderflow[threadId];
  long&                         threadOverflow   = m_ThreadOverflow[threadId];
  ImageRegionConstIteratorType& firstImageRegion = Vit.front(); // alias for better perfs
  while (!firstImageRegion.IsAtEnd())
  {
    for (j = 0; j < nbInputImages; ++j)
    {
      threadImage[j] = static_cast<double>(Vit[j].Get());
    }
 
    // Image Indexes
    for (j = 0; j < 2; ++j)
    {
      threadImage[nbInputImages + j] = static_cast<double>(firstImageRegion.GetIndex()[j]);
    }
    for (j = 0; j < 2; ++j)
    {
      threadImage[nbInputImages + 2 + j] =
          static_cast<double>(m_Origin[j]) + static_cast<double>(firstImageRegion.GetIndex()[j]) * static_cast<double>(m_Spacing[j]);
    }
 
    try
    {
 
      value = threadParser->Eval();
    }
    catch (itk::ExceptionObject& err)
    {
      itkExceptionMacro(<< err);
    }
 
    // Case value is equal to -inf or inferior to the minimum value
    // allowed by the pixelType cast
    if (value < double(itk::NumericTraits<PixelType>::NonpositiveMin()))
    {
      ot.Set(itk::NumericTraits<PixelType>::NonpositiveMin());
      threadUnderflow++;
    }
    // Case value is equal to inf or superior to the maximum value
    // allowed by the pixelType cast
    else if (value > double(itk::NumericTraits<PixelType>::max()))
    {
      ot.Set(itk::NumericTraits<PixelType>::max());
      threadOverflow++;
    }
    else
    {
      ot.Set(static_cast<PixelType>(value));
    }
 
    for (j = 0; j < nbInputImages; ++j)
    {
      ++Vit[j];
    }
 
    ++ot;
 
    progress.CompletedPixel();
  }
}
 
} // end namespace otb
 
#endif