Orfeo Toolbox  4.0
Public Types | Public Member Functions | Static Public Member Functions | Static Public Attributes | Protected Types | Protected Member Functions | Protected Attributes | Private Member Functions | List of all members
otb::SOMMap< TNeuron, TDistance, VMapDimension > Class Template Reference

This class represent a Self Organizing Map. More...

#include <otbSOMMap.h>

+ Inheritance diagram for otb::SOMMap< TNeuron, TDistance, VMapDimension >:
+ Collaboration diagram for otb::SOMMap< TNeuron, TDistance, VMapDimension >:

Public Types

typedef
itk::DefaultVectorPixelAccessorFunctor
< Self
AccessorFunctorType
 
typedef
DefaultVectorPixelAccessor
< InternalPixelType
AccessorType
 
typedef itk::SmartPointer
< const Self
ConstPointer
 
typedef itk::WeakPointer
< const Self
ConstWeakPointer
 
typedef std::string DataObjectIdentifierType
 
typedef std::vector< Pointer >
::size_type 
DataObjectPointerArraySizeType
 
typedef Superclass::DirectionType DirectionType
 
typedef DistanceType::Pointer DistancePointerType
 
typedef TDistance DistanceType
 
typedef
ImageMetadataInterfaceBase::ImageKeywordlistType 
ImageKeywordlistType
 
typedef
ImageMetadataInterfaceBase::Pointer 
ImageMetadataInterfacePointerType
 
typedef Superclass::IndexType IndexType
 
typedef Superclass::IndexValueType IndexValueType
 
typedef
Superclass::InternalPixelType 
InternalPixelType
 
typedef Superclass::IOPixelType IOPixelType
 
typedef
itk::VectorImageNeighborhoodAccessorFunctor
< Self
NeighborhoodAccessorFunctorType
 
typedef TNeuron NeuronType
 
typedef Superclass::OffsetType OffsetType
 
typedef Superclass::OffsetValueType OffsetValueType
 
typedef Superclass::PixelContainer PixelContainer
 
typedef
PixelContainer::ConstPointer 
PixelContainerConstPointer
 
typedef PixelContainer::Pointer PixelContainerPointer
 
typedef Superclass::PixelType PixelType
 
typedef itk::SmartPointer< SelfPointer
 
typedef Superclass::PointType PointType
 
typedef SpacePrecisionType PointValueType
 
typedef Superclass::RegionType RegionType
 
typedef SOMMap Self
 
typedef Superclass::SizeType SizeType
 
typedef SizeType::SizeValueType SizeValueType
 
typedef Superclass::SpacingType SpacingType
 
typedef SpacePrecisionType SpacingValueType
 
typedef otb::VectorImage
< typename
TNeuron::ComponentType,
VMapDimension > 
Superclass
 
typedef Superclass::ValueType ValueType
 
typedef unsigned int VectorLengthType
 
typedef
ImageMetadataInterfaceBase::VectorType 
VectorType
 

Public Member Functions

unsigned long AddObserver (const EventObject &event, Command *)
 
unsigned long AddObserver (const EventObject &event, Command *) const
 
void Allocate ()
 
IndexType ComputeIndex (OffsetValueType offset) const
 
OffsetValueType ComputeOffset (const IndexType &ind) const
 
virtual void CopyInformation (const itk::DataObject *)
 Copy metadata from a DataObject. More...
 
virtual ::itk::LightObject::Pointer CreateAnother (void) const
 
virtual void DataHasBeenGenerated ()
 
virtual void DebugOff () const
 
virtual void DebugOn () const
 
virtual void Delete ()
 
void DisconnectPipeline ()
 
void FillBuffer (const PixelType &value)
 
virtual const RegionTypeGetBufferedRegion () const
 
InternalPixelTypeGetBufferPointer ()
 
const InternalPixelTypeGetBufferPointer () const
 
Command * GetCommand (unsigned long tag)
 
bool GetDataReleased () const
 
bool GetDebug () const
 
virtual const DirectionTypeGetDirection ()
 
virtual double GetGCPCol (unsigned int GCPnum) const
 
virtual unsigned int GetGCPCount (void) const
 
virtual std::string GetGCPId (unsigned int GCPnum) const
 
virtual std::string GetGCPInfo (unsigned int GCPnum) const
 
virtual std::string GetGCPProjection (void) const
 
virtual double GetGCPRow (unsigned int GCPnum) const
 
virtual OTB_GCPGetGCPs (unsigned int GCPnum)
 
virtual const OTB_GCPGetGCPs (unsigned int GCPnum) const
 
virtual double GetGCPX (unsigned int GCPnum) const
 
virtual double GetGCPY (unsigned int GCPnum) const
 
virtual double GetGCPZ (unsigned int GCPnum) const
 
virtual VectorType GetGeoTransform (void) const
 
virtual ImageKeywordlistType GetImageKeywordlist (void)
 
virtual const ImageKeywordlistType GetImageKeywordlist (void) const
 
virtual const DirectionTypeGetInverseDirection ()
 
virtual const RegionTypeGetLargestPossibleRegion () const
 
virtual VectorType GetLowerLeftCorner (void) const
 
virtual VectorType GetLowerRightCorner (void) const
 
MetaDataDictionary & GetMetaDataDictionary (void)
 
const MetaDataDictionary & GetMetaDataDictionary (void) const
 
virtual ModifiedTimeType GetMTime () const
 
virtual const char * GetNameOfClass () const
 
NeighborhoodAccessorFunctorType GetNeighborhoodAccessor ()
 
const
NeighborhoodAccessorFunctorType 
GetNeighborhoodAccessor () const
 
virtual unsigned int GetNumberOfComponentsPerPixel () const
 
virtual const std::string & GetObjectName ()
 
const OffsetValueTypeGetOffsetTable () const
 
virtual const PointTypeGetOrigin ()
 
virtual const ModifiedTimeType & GetPipelineMTime ()
 
const PixelType GetPixel (const IndexType &index) const
 Get a pixel (read only version). More...
 
PixelType GetPixel (const IndexType &index)
 Get a "reference" to a pixel. This result cannot be used as an lvalue because the pixel is converted on the fly to a VariableLengthVector. More...
 
AccessorType GetPixelAccessor (void)
 
const AccessorType GetPixelAccessor (void) const
 
PixelContainerGetPixelContainer ()
 
const PixelContainerGetPixelContainer () const
 
virtual std::string GetProjectionRef (void) const
 
virtual const RealTimeStamp & GetRealTimeStamp ()
 
virtual int GetReferenceCount () const
 
virtual const bool & GetReleaseDataFlag ()
 
virtual const RegionTypeGetRequestedRegion () const
 
SmartPointerForwardReference
< ProcessObject
GetSource () const
 
DataObjectPointerArraySizeType GetSourceOutputIndex () const
 
const DataObjectIdentifierTypeGetSourceOutputName () const
 
virtual const SpacingTypeGetSpacing ()
 
virtual const TimeStamp & GetTimeStamp () const
 
virtual ModifiedTimeType GetUpdateMTime () const
 
virtual VectorType GetUpperLeftCorner (void) const
 
virtual VectorType GetUpperRightCorner (void) const
 
virtual const VectorLengthTypeGetVectorLength ()
 
IndexType GetWinner (const NeuronType &sample)
 
virtual void Graft (const DataObject *data)
 
bool HasObserver (const EventObject &event) const
 
virtual void Initialize ()
 
void InvokeEvent (const EventObject &)
 
void InvokeEvent (const EventObject &) const
 
 itkCloneMacro (Self)
 
virtual void Modified () const
 
PixelType operator[] (const IndexType &index)
 Access a pixel. This result cannot be used as an lvalue because the pixel is converted on the fly to a VariableLengthVector. More...
 
const PixelType operator[] (const IndexType &index) const
 Access a pixel. More...
 
virtual void PrepareForNewData ()
 
void Print (std::ostream &os, Indent indent=0) const
 
virtual void PropagateRequestedRegion ()
 
virtual void Register () const
 
void ReleaseData ()
 
virtual void ReleaseDataFlagOff ()
 
virtual void ReleaseDataFlagOn ()
 
void RemoveAllObservers ()
 
void RemoveObserver (unsigned long tag)
 
virtual bool RequestedRegionIsOutsideOfTheBufferedRegion ()
 
virtual void ResetPipeline ()
 
virtual void SetBufferedRegion (const RegionType &region)
 
void SetDebug (bool debugFlag) const
 
virtual void SetDirection (const DirectionType &direction)
 
virtual void SetLargestPossibleRegion (const RegionType &region)
 
void SetMetaDataDictionary (const MetaDataDictionary &rhs)
 
virtual void SetNumberOfComponentsPerPixel (unsigned int n)
 
virtual void SetObjectName (std::string _arg)
 
virtual void SetOrigin (PointType _arg)
 
virtual void SetOrigin (const double origin[VImageDimension])
 
virtual void SetOrigin (const float origin[VImageDimension])
 
void SetPipelineMTime (ModifiedTimeType time)
 
void SetPixel (const IndexType &index, const PixelType &value)
 Set a pixel value. More...
 
void SetPixelContainer (PixelContainer *container)
 
virtual void SetRealTimeStamp (RealTimeStamp _arg)
 
virtual void SetReferenceCount (int)
 
virtual void SetRegions (const RegionType &region)
 
virtual void SetRegions (const SizeType &size)
 
void SetReleaseDataFlag (bool flag)
 
virtual void SetRequestedRegion (const RegionType &region)
 
virtual void SetRequestedRegion (const DataObject *data)
 
virtual void SetRequestedRegionToLargestPossibleRegion ()
 
virtual void SetSpacing (const SpacingType &spacing)
 
virtual void SetSpacing (const double spacing[VImageDimension])
 
virtual void SetSpacing (const float spacing[VImageDimension])
 
virtual void SetVectorLength (VectorLengthType _arg)
 
bool ShouldIReleaseData () const
 
template<typename TCoordRep , typename TIndexRep >
void TransformContinuousIndexToPhysicalPoint (const ContinuousIndex< TIndexRep, VImageDimension > &index, Point< TCoordRep, VImageDimension > &point) const
 
template<typename TCoordRep >
void TransformIndexToPhysicalPoint (const IndexType &index, Point< TCoordRep, VImageDimension > &point) const
 
template<typename TCoordRep >
void TransformLocalVectorToPhysicalVector (const FixedArray< TCoordRep, VImageDimension > &inputGradient, FixedArray< TCoordRep, VImageDimension > &outputGradient) const
 
template<typename TCoordRep , typename TIndexRep >
bool TransformPhysicalPointToContinuousIndex (const Point< TCoordRep, VImageDimension > &point, ContinuousIndex< TIndexRep, VImageDimension > &index) const
 Get the continuous index from a physical point. More...
 
template<typename TCoordRep >
bool TransformPhysicalPointToIndex (const Point< TCoordRep, VImageDimension > &point, IndexType &index) const
 
template<typename TCoordRep >
void TransformPhysicalVectorToLocalVector (const FixedArray< TCoordRep, VImageDimension > &inputGradient, FixedArray< TCoordRep, VImageDimension > &outputGradient) const
 
virtual void UnRegister () const
 
virtual void Update ()
 
virtual void UpdateOutputData ()
 
virtual void UpdateOutputInformation ()
 
virtual bool VerifyRequestedRegion ()
 

Static Public Member Functions

static void BreakOnError ()
 
static bool GetGlobalReleaseDataFlag ()
 
static bool GetGlobalWarningDisplay ()
 
static unsigned int GetImageDimension ()
 
static void GlobalReleaseDataFlagOff ()
 
static void GlobalReleaseDataFlagOn ()
 
static void GlobalWarningDisplayOff ()
 
static void GlobalWarningDisplayOn ()
 
static Pointer New ()
 
static void SetGlobalReleaseDataFlag (bool val)
 
static void SetGlobalWarningDisplay (bool flag)
 

Static Public Attributes

static const unsigned int ImageDimension
 

Protected Types

typedef int InternalReferenceCountType
 

Protected Member Functions

 SOMMap ()
 
virtual ~SOMMap ()
 
virtual void ComputeIndexToPhysicalPointMatrices ()
 
void ComputeOffsetTable ()
 
virtual void InitializeBufferedRegion (void)
 
virtual LightObject::Pointer InternalClone () const
 
virtual void PrintHeader (std::ostream &os, Indent indent) const
 
bool PrintObservers (std::ostream &os, Indent indent) const
 
void PrintSelf (std::ostream &os, itk::Indent indent) const
 
virtual void PrintTrailer (std::ostream &os, Indent indent) const
 
virtual void PropagateResetPipeline ()
 
virtual void SetTimeStamp (const TimeStamp &time)
 

Protected Attributes

DirectionType m_Direction
 
DirectionType m_IndexToPhysicalPoint
 
DirectionType m_InverseDirection
 
PointType m_Origin
 
DirectionType m_PhysicalPointToIndex
 
InternalReferenceCountType m_ReferenceCount
 
SimpleFastMutexLock m_ReferenceCountLock
 
SpacingType m_Spacing
 

Private Member Functions

 SOMMap (const Self &)
 
void operator= (const Self &)
 

Detailed Description

template<class TNeuron = itk::VariableLengthVector<double>, class TDistance = itk::Statistics::EuclideanDistanceMetric<TNeuron>, unsigned int VMapDimension = 2>
class otb::SOMMap< TNeuron, TDistance, VMapDimension >

This class represent a Self Organizing Map.

The Self organizing map (or Kohonen map) is a type of neural networks. It is based on an analogy with the visual cortex, where similar inputs activate neighbor neurons.

This class extends the Image object, where each pixel represents a neuron in the map. It is templated with a distance parameter used to compute the neuron response to an input. Thanks to the extension of the Image object, reading and writing is supported through standard image readers and writers.

The training is done via the SOM class, and the activation map can be produced with the SOMActivationBuilder class.

See Also
SOM
SOMActivationBuilder

Definition at line 51 of file otbSOMMap.h.

Member Typedef Documentation

typedef itk::DefaultVectorPixelAccessorFunctor<Self> otb::VectorImage< TNeuron::ComponentType , VImageDimension >::AccessorFunctorType
inherited

Accessor type that convert data between internal and external representations. Functor to provide a common API between DefaultPixelAccessor and DefaultVectorPixelAccessor

Definition at line 73 of file otbVectorImage.h.

typedef DefaultVectorPixelAccessor< InternalPixelType > itk::VectorImage< TNeuron::ComponentType , VImageDimension >::AccessorType
inherited

Accessor type that convert data between internal and external representations.

Definition at line 116 of file itkVectorImage.h.

template<class TNeuron = itk::VariableLengthVector<double>, class TDistance = itk::Statistics::EuclideanDistanceMetric<TNeuron>, unsigned int VMapDimension = 2>
typedef itk::SmartPointer<const Self> otb::SOMMap< TNeuron, TDistance, VMapDimension >::ConstPointer

Definition at line 59 of file otbSOMMap.h.

typedef itk::WeakPointer<const Self> otb::VectorImage< TNeuron::ComponentType , VImageDimension >::ConstWeakPointer
inherited

Definition at line 40 of file otbVectorImage.h.

typedef std::string itk::DataObject::DataObjectIdentifierType
inherited

Definition at line 284 of file itkDataObject.h.

typedef std::vector< Pointer >::size_type itk::DataObject::DataObjectPointerArraySizeType
inherited

Which of the source's outputs corresponds to this data object?

Definition at line 314 of file itkDataObject.h.

template<class TNeuron = itk::VariableLengthVector<double>, class TDistance = itk::Statistics::EuclideanDistanceMetric<TNeuron>, unsigned int VMapDimension = 2>
typedef Superclass::DirectionType otb::SOMMap< TNeuron, TDistance, VMapDimension >::DirectionType

Definition at line 77 of file otbSOMMap.h.

template<class TNeuron = itk::VariableLengthVector<double>, class TDistance = itk::Statistics::EuclideanDistanceMetric<TNeuron>, unsigned int VMapDimension = 2>
typedef DistanceType::Pointer otb::SOMMap< TNeuron, TDistance, VMapDimension >::DistancePointerType

Definition at line 72 of file otbSOMMap.h.

template<class TNeuron = itk::VariableLengthVector<double>, class TDistance = itk::Statistics::EuclideanDistanceMetric<TNeuron>, unsigned int VMapDimension = 2>
typedef TDistance otb::SOMMap< TNeuron, TDistance, VMapDimension >::DistanceType

Definition at line 71 of file otbSOMMap.h.

typedef ImageMetadataInterfaceBase::ImageKeywordlistType otb::VectorImage< TNeuron::ComponentType , VImageDimension >::ImageKeywordlistType
inherited

Definition at line 43 of file otbVectorImage.h.

typedef ImageMetadataInterfaceBase::Pointer otb::VectorImage< TNeuron::ComponentType , VImageDimension >::ImageMetadataInterfacePointerType
inherited

Definition at line 44 of file otbVectorImage.h.

template<class TNeuron = itk::VariableLengthVector<double>, class TDistance = itk::Statistics::EuclideanDistanceMetric<TNeuron>, unsigned int VMapDimension = 2>
typedef Superclass::IndexType otb::SOMMap< TNeuron, TDistance, VMapDimension >::IndexType

Superclass related typedefs

Definition at line 75 of file otbSOMMap.h.

typedef Superclass::IndexValueType itk::VectorImage< TNeuron::ComponentType , VImageDimension >::IndexValueType
inherited

Definition at line 135 of file itkVectorImage.h.

typedef Superclass::InternalPixelType otb::VectorImage< TNeuron::ComponentType , VImageDimension >::InternalPixelType
inherited

Internal Pixel representation. Used to maintain a uniform API with Image Adaptors and allow to keep a particular internal representation of data while showing a different external representation.

Definition at line 63 of file otbVectorImage.h.

typedef int itk::LightObject::InternalReferenceCountType
protectedinherited

Define the type of the reference count according to the target. This allows the use of atomic operations

Definition at line 152 of file itkLightObject.h.

typedef Superclass::IOPixelType otb::VectorImage< TNeuron::ComponentType , VImageDimension >::IOPixelType
inherited

Definition at line 65 of file otbVectorImage.h.

typedef itk::VectorImageNeighborhoodAccessorFunctor< Self> otb::VectorImage< TNeuron::ComponentType , VImageDimension >::NeighborhoodAccessorFunctorType
inherited

Tyepdef for the functor used to access a neighborhood of pixel pointers.

Definition at line 77 of file otbVectorImage.h.

template<class TNeuron = itk::VariableLengthVector<double>, class TDistance = itk::Statistics::EuclideanDistanceMetric<TNeuron>, unsigned int VMapDimension = 2>
typedef TNeuron otb::SOMMap< TNeuron, TDistance, VMapDimension >::NeuronType

There is no runtime informations macro since this class has to be considered to as a simple VectorImage // itkTypeMacro(SOMMap, VectorImage);Template parameters related typedefs

Definition at line 62 of file otbSOMMap.h.

typedef Superclass::OffsetType otb::VectorImage< TNeuron::ComponentType , VImageDimension >::OffsetType
inherited

Offset typedef support. An offset is used to access pixel values.

Definition at line 92 of file otbVectorImage.h.

typedef Superclass::OffsetValueType itk::VectorImage< TNeuron::ComponentType , VImageDimension >::OffsetValueType
inherited

Offset typedef (relative position between indices)

Definition at line 166 of file itkVectorImage.h.

typedef Superclass::PixelContainer otb::VectorImage< TNeuron::ComponentType , VImageDimension >::PixelContainer
inherited

Container used to store pixels in the image.

Definition at line 86 of file otbVectorImage.h.

typedef PixelContainer::ConstPointer itk::VectorImage< TNeuron::ComponentType , VImageDimension >::PixelContainerConstPointer
inherited

Definition at line 163 of file itkVectorImage.h.

typedef PixelContainer::Pointer itk::VectorImage< TNeuron::ComponentType , VImageDimension >::PixelContainerPointer
inherited

A pointer to the pixel container.

Definition at line 162 of file itkVectorImage.h.

typedef Superclass::PixelType otb::VectorImage< TNeuron::ComponentType , VImageDimension >::PixelType
inherited

Pixel typedef support. Used to declare pixel type in filters or other operations.

Definition at line 50 of file otbVectorImage.h.

template<class TNeuron = itk::VariableLengthVector<double>, class TDistance = itk::Statistics::EuclideanDistanceMetric<TNeuron>, unsigned int VMapDimension = 2>
typedef itk::SmartPointer<Self> otb::SOMMap< TNeuron, TDistance, VMapDimension >::Pointer

Definition at line 58 of file otbSOMMap.h.

template<class TNeuron = itk::VariableLengthVector<double>, class TDistance = itk::Statistics::EuclideanDistanceMetric<TNeuron>, unsigned int VMapDimension = 2>
typedef Superclass::PointType otb::SOMMap< TNeuron, TDistance, VMapDimension >::PointType

Definition at line 80 of file otbSOMMap.h.

template<unsigned int VImageDimension = 2>
typedef SpacePrecisionType itk::ImageBase< VImageDimension >::PointValueType
inherited

Origin typedef support. The origin is the geometric coordinates of the index (0,0).

Definition at line 158 of file itkImageBase.h.

template<class TNeuron = itk::VariableLengthVector<double>, class TDistance = itk::Statistics::EuclideanDistanceMetric<TNeuron>, unsigned int VMapDimension = 2>
typedef Superclass::RegionType otb::SOMMap< TNeuron, TDistance, VMapDimension >::RegionType

Definition at line 78 of file otbSOMMap.h.

template<class TNeuron = itk::VariableLengthVector<double>, class TDistance = itk::Statistics::EuclideanDistanceMetric<TNeuron>, unsigned int VMapDimension = 2>
typedef SOMMap otb::SOMMap< TNeuron, TDistance, VMapDimension >::Self

Standard typedefs

Definition at line 56 of file otbSOMMap.h.

template<class TNeuron = itk::VariableLengthVector<double>, class TDistance = itk::Statistics::EuclideanDistanceMetric<TNeuron>, unsigned int VMapDimension = 2>
typedef Superclass::SizeType otb::SOMMap< TNeuron, TDistance, VMapDimension >::SizeType

Definition at line 76 of file otbSOMMap.h.

template<unsigned int VImageDimension = 2>
typedef SizeType::SizeValueType itk::ImageBase< VImageDimension >::SizeValueType
inherited

Definition at line 144 of file itkImageBase.h.

template<class TNeuron = itk::VariableLengthVector<double>, class TDistance = itk::Statistics::EuclideanDistanceMetric<TNeuron>, unsigned int VMapDimension = 2>
typedef Superclass::SpacingType otb::SOMMap< TNeuron, TDistance, VMapDimension >::SpacingType

Definition at line 79 of file otbSOMMap.h.

template<unsigned int VImageDimension = 2>
typedef SpacePrecisionType itk::ImageBase< VImageDimension >::SpacingValueType
inherited

Spacing typedef support. Spacing holds the size of a pixel. The spacing is the geometric distance between image samples along each dimension. ITK only supports positive spacing value: negative values may cause undesirable results.

Definition at line 153 of file itkImageBase.h.

template<class TNeuron = itk::VariableLengthVector<double>, class TDistance = itk::Statistics::EuclideanDistanceMetric<TNeuron>, unsigned int VMapDimension = 2>
typedef otb::VectorImage<typename TNeuron::ComponentType, VMapDimension> otb::SOMMap< TNeuron, TDistance, VMapDimension >::Superclass

Definition at line 57 of file otbSOMMap.h.

typedef Superclass::ValueType otb::VectorImage< TNeuron::ComponentType , VImageDimension >::ValueType
inherited

Typedef alias for PixelType

Definition at line 57 of file otbVectorImage.h.

typedef unsigned int itk::VectorImage< TNeuron::ComponentType , VImageDimension >::VectorLengthType
inherited

Definition at line 168 of file itkVectorImage.h.

typedef ImageMetadataInterfaceBase::VectorType otb::VectorImage< TNeuron::ComponentType , VImageDimension >::VectorType
inherited

Definition at line 42 of file otbVectorImage.h.

Constructor & Destructor Documentation

template<class TNeuron , class TDistance , unsigned int VMapDimension>
otb::SOMMap< TNeuron, TDistance, VMapDimension >::SOMMap ( )
protected

Constructor

Definition at line 33 of file otbSOMMap.txx.

template<class TNeuron , class TDistance , unsigned int VMapDimension>
otb::SOMMap< TNeuron, TDistance, VMapDimension >::~SOMMap ( )
protectedvirtual

Destructor

Definition at line 40 of file otbSOMMap.txx.

template<class TNeuron = itk::VariableLengthVector<double>, class TDistance = itk::Statistics::EuclideanDistanceMetric<TNeuron>, unsigned int VMapDimension = 2>
otb::SOMMap< TNeuron, TDistance, VMapDimension >::SOMMap ( const Self )
private

Member Function Documentation

unsigned long itk::Object::AddObserver ( const EventObject event,
Command cmd 
)
inherited

Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects

Definition at line 398 of file itkObject.cxx.

References itk::SubjectImplementation::AddObserver().

Referenced by otb::StreamingImageVirtualWriter< TInputImage >::GenerateData(), itk::ProgressAccumulator::RegisterInternalFilter(), otb::ImageFileWriter< TInputImage >::Update(), and otb::WriterWatcherBase::WriterWatcherBase().

unsigned long itk::Object::AddObserver ( const EventObject event,
Command cmd 
) const
inherited

Definition at line 409 of file itkObject.cxx.

References itk::SubjectImplementation::AddObserver().

void itk::VectorImage< TNeuron::ComponentType , VImageDimension >::Allocate ( )
virtualinherited

Allocate the image memory. The size of the image must already be set, e.g. by calling SetRegions().

Reimplemented from itk::ImageBase< VImageDimension >.

void itk::LightObject::BreakOnError ( )
staticinherited

This method is called when itkExceptionMacro executes. It allows the debugger to break on error.

Definition at line 150 of file itkLightObject.cxx.

template<unsigned int VImageDimension = 2>
IndexType itk::ImageBase< VImageDimension >::ComputeIndex ( OffsetValueType  offset) const
inlineinherited

Compute the index of the pixel at a specified offset from the beginning of the buffered region. Bounds checking is not performed. Thus, the computed index could be outside the BufferedRegion. To ensure a valid index, the parameter "offset" should be between 0 and the number of pixels in the BufferedRegion (the latter can be found using ImageRegion::GetNumberOfPixels()).

Definition at line 363 of file itkImageBase.h.

template<unsigned int VImageDimension>
void itk::ImageBase< VImageDimension >::ComputeIndexToPhysicalPointMatrices ( )
protectedvirtualinherited

Compute helper matrices used to transform Index coordinates to PhysicalPoint coordinates and back. This method is virtual and will be overloaded in derived classes in order to provide backward compatibility behavior in classes that did not used to take image orientation into account.

Reimplemented in itk::Image< TPixel, VImageDimension >, itk::Image< TInputPixel, VImageDimension >, itk::Image< TOutputPixelType, VImageDimension >, itk::Image< TOutputPixel, VImageDimension >, and itk::Image< TNode *, VImageDimension >.

Definition at line 176 of file itkImageBase.hxx.

References itk::Matrix< T, NRows, NColumns >::GetInverse().

template<unsigned int VImageDimension = 2>
OffsetValueType itk::ImageBase< VImageDimension >::ComputeOffset ( const IndexType ind) const
inlineinherited

Compute an offset from the beginning of the buffer for a pixel at the specified index. The index is not checked as to whether it is inside the current buffer, so the computed offset could conceivably be outside the buffer. If bounds checking is needed, one can call ImageRegion::IsInside(ind) on the BufferedRegion prior to calling ComputeOffset.

Definition at line 328 of file itkImageBase.h.

Referenced by itk::Image< TNode *, VImageDimension >::GetPixel(), itk::SpecialCoordinatesImage< TPixel, 3 >::GetPixel(), itk::VectorImage< TPixelType, Dimension >::GetPixel(), itk::Image< TNode *, VImageDimension >::SetPixel(), itk::SpecialCoordinatesImage< TPixel, 3 >::SetPixel(), and itk::VectorImage< TPixelType, Dimension >::SetPixel().

template<unsigned int VImageDimension>
void itk::ImageBase< VImageDimension >::ComputeOffsetTable ( )
protectedinherited

Calculate the offsets needed to move from one pixel to the next along a row, column, slice, volume, etc. These offsets are based on the size of the BufferedRegion. This should be called after the BufferedRegion is set.

Definition at line 204 of file itkImageBase.hxx.

References itk::Size< VDimension >::GetSize().

virtual void otb::VectorImage< TNeuron::ComponentType , VImageDimension >::CopyInformation ( const itk::DataObject )
virtualinherited

Copy metadata from a DataObject.

Reimplemented from itk::ImageBase< VImageDimension >.

template<class TNeuron = itk::VariableLengthVector<double>, class TDistance = itk::Statistics::EuclideanDistanceMetric<TNeuron>, unsigned int VMapDimension = 2>
virtual::itk::LightObject::Pointer otb::SOMMap< TNeuron, TDistance, VMapDimension >::CreateAnother ( void  ) const
virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

void itk::DataObject::DataHasBeenGenerated ( )
virtualinherited

Inform the pipeline mechanism that data has been generated. This method is called by ProcessObject::UpdateOutputData() once the process object has finished generating its data. This essentially marks the DataObject as being updated and ready for use.

Reimplemented in itk::GPUImage< TPixel, VImageDimension >.

Definition at line 442 of file itkDataObject.cxx.

Referenced by itk::GPUImage< TPixel, VImageDimension >::DataHasBeenGenerated(), and itk::TemporalProcessObject::UpdateOutputData().

void itk::Object::DebugOff ( ) const
virtualinherited

Turn debugging output off.

Definition at line 253 of file itkObject.cxx.

void itk::Object::DebugOn ( ) const
virtualinherited

Turn debugging output on.

Definition at line 243 of file itkObject.cxx.

void itk::LightObject::Delete ( )
virtualinherited

Delete an itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C delete method will not work with reference counting.

Delete a itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C++ delete method will not work with reference counting.

Definition at line 91 of file itkLightObject.cxx.

void itk::DataObject::DisconnectPipeline ( )
inherited

Separate this data object from the pipeline. This routine disconnects a data object from the upstream pipeline. Hence an Update() from downstream will not propagate back past this data object. To completely isolate this data object from the pipeline, the application must remove this data object from any filters which it is connected as the input.

Definition at line 222 of file itkDataObject.cxx.

References NULL.

void itk::VectorImage< TNeuron::ComponentType , VImageDimension >::FillBuffer ( const PixelType value)
inherited

Fill the image buffer with a value. Be sure to call Allocate() first.

template<unsigned int VImageDimension = 2>
virtual const RegionType& itk::ImageBase< VImageDimension >::GetBufferedRegion ( ) const
inlinevirtualinherited

Get the region object that defines the size and starting index of the region of the image currently loaded in memory.

See Also
ImageRegion, SetLargestPossibleRegion(), SetRequestedRegion()

Reimplemented in itk::ImageAdaptor< TImage, TAccessor >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, otb::Accessor::VectorImageToASPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ShiftScalePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexConjugatePixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >.

Definition at line 263 of file itkImageBase.h.

Referenced by itk::ImageBase< TImage::ImageDimension >::ComputeIndex(), itk::ImageBase< TImage::ImageDimension >::ComputeOffset(), itk::watershed::Relabeler< TScalar, TImageDimension >::GraftNthOutput(), itk::DeformableSimplexMesh3DFilter< TInputMesh, TOutputMesh >::Initialize(), and itk::N4BiasFieldCorrectionImageFilter< TInputImage, TMaskImage, TOutputImage >::UpdateBiasFieldEstimate().

InternalPixelType* itk::VectorImage< TNeuron::ComponentType , VImageDimension >::GetBufferPointer ( )
inlineinherited

Return a pointer to the beginning of the buffer. This is used by the image iterator class.

Definition at line 277 of file itkVectorImage.h.

const InternalPixelType* itk::VectorImage< TNeuron::ComponentType , VImageDimension >::GetBufferPointer ( ) const
inlineinherited

Definition at line 281 of file itkVectorImage.h.

Command * itk::Object::GetCommand ( unsigned long  tag)
inherited

Get the command associated with the given tag. NOTE: This returns a pointer to a Command, but it is safe to assign this to a Command::Pointer. Since Command inherits from LightObject, at this point in the code, only a pointer or a reference to the Command can be used.

Definition at line 421 of file itkObject.cxx.

References itk::Object::GetCommand(), and NULL.

Referenced by itk::Object::GetCommand().

bool itk::DataObject::GetDataReleased ( ) const
inlineinherited

Get the flag indicating the data has been released.

Definition at line 354 of file itkDataObject.h.

bool itk::Object::GetDebug ( ) const
inherited

Get the value of the debug flag.

Definition at line 263 of file itkObject.cxx.

Referenced by otb::ogr::ImageReference< double >::GetDebug().

template<unsigned int VImageDimension = 2>
virtual const DirectionType& itk::ImageBase< VImageDimension >::GetDirection ( )
virtualinherited

Get the direction cosines of the image. The direction cosines are vectors that point from one pixel to the next. For ImageBase and Image, the default direction is identity.

Reimplemented in itk::ImageAdaptor< TImage, TAccessor >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, otb::Accessor::VectorImageToASPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ShiftScalePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexConjugatePixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >.

Referenced by itk::DiffusionTensor3DReconstructionImageFilter< TReferenceImagePixelType, TGradientImagePixelType, TTensorPixelType, TMaskImageType >::BeforeThreadedGenerateData(), itk::VelocityFieldTransform< TScalar, NDimensions >::CopyDisplacementField(), itk::ConstantVelocityFieldTransform< TScalar, NDimensions >::CopyDisplacementField(), itk::ImageBase< VImageDimension >::CopyInformation(), itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType, TTransformPrecisionType >::GenerateOutputInformation(), itk::TransformToDisplacementFieldSource< TOutputImage, TTransformPrecisionType >::SetOutputParametersFromImage(), itk::TransformToDeformationFieldSource< TOutputImage, TTransformPrecisionType >::SetOutputParametersFromImage(), otb::WarpImageFilter< TInputImage, TOutputImage, TDisplacementField >::SetOutputParametersFromImage(), itk::WarpImageFilter< TInputImage, TOutputImage, TDisplacementField >::SetOutputParametersFromImage(), itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType, TTransformPrecisionType >::SetOutputParametersFromImage(), itk::ImageBase< TImage::ImageDimension >::TransformLocalVectorToPhysicalVector(), and itk::N4BiasFieldCorrectionImageFilter< TInputImage, TMaskImage, TOutputImage >::UpdateBiasFieldEstimate().

virtual double otb::VectorImage< TNeuron::ComponentType , VImageDimension >::GetGCPCol ( unsigned int  GCPnum) const
virtualinherited
virtual unsigned int otb::VectorImage< TNeuron::ComponentType , VImageDimension >::GetGCPCount ( void  ) const
virtualinherited
virtual std::string otb::VectorImage< TNeuron::ComponentType , VImageDimension >::GetGCPId ( unsigned int  GCPnum) const
virtualinherited
virtual std::string otb::VectorImage< TNeuron::ComponentType , VImageDimension >::GetGCPInfo ( unsigned int  GCPnum) const
virtualinherited
virtual std::string otb::VectorImage< TNeuron::ComponentType , VImageDimension >::GetGCPProjection ( void  ) const
virtualinherited

Get the GCP projection coordinates of the image.

virtual double otb::VectorImage< TNeuron::ComponentType , VImageDimension >::GetGCPRow ( unsigned int  GCPnum) const
virtualinherited
virtual OTB_GCP& otb::VectorImage< TNeuron::ComponentType , VImageDimension >::GetGCPs ( unsigned int  GCPnum)
virtualinherited
virtual const OTB_GCP& otb::VectorImage< TNeuron::ComponentType , VImageDimension >::GetGCPs ( unsigned int  GCPnum) const
virtualinherited
virtual double otb::VectorImage< TNeuron::ComponentType , VImageDimension >::GetGCPX ( unsigned int  GCPnum) const
virtualinherited
virtual double otb::VectorImage< TNeuron::ComponentType , VImageDimension >::GetGCPY ( unsigned int  GCPnum) const
virtualinherited
virtual double otb::VectorImage< TNeuron::ComponentType , VImageDimension >::GetGCPZ ( unsigned int  GCPnum) const
virtualinherited
virtual VectorType otb::VectorImage< TNeuron::ComponentType , VImageDimension >::GetGeoTransform ( void  ) const
virtualinherited

Get the six coefficients of affine geoTtransform.

bool itk::DataObject::GetGlobalReleaseDataFlag ( )
staticinherited

Definition at line 195 of file itkDataObject.cxx.

bool itk::Object::GetGlobalWarningDisplay ( )
staticinherited

Get the value of the global debug output control flag.

Definition at line 391 of file itkObject.cxx.

template<unsigned int VImageDimension = 2>
static unsigned int itk::ImageBase< VImageDimension >::GetImageDimension ( )
inlinestaticinherited

Image dimension. The dimension of an image is fixed at construction.

Definition at line 170 of file itkImageBase.h.

virtual ImageKeywordlistType otb::VectorImage< TNeuron::ComponentType , VImageDimension >::GetImageKeywordlist ( void  )
virtualinherited

Get image keyword list

virtual const ImageKeywordlistType otb::VectorImage< TNeuron::ComponentType , VImageDimension >::GetImageKeywordlist ( void  ) const
virtualinherited
template<unsigned int VImageDimension = 2>
virtual const DirectionType& itk::ImageBase< VImageDimension >::GetInverseDirection ( )
virtualinherited

Get the inverse direction cosines of the image. These are calculated automatically in SetDirection, thus there is no Set accessor.

Referenced by itk::ImageBase< TImage::ImageDimension >::TransformPhysicalVectorToLocalVector().

template<unsigned int VImageDimension = 2>
virtual const RegionType& itk::ImageBase< VImageDimension >::GetLargestPossibleRegion ( ) const
inlinevirtualinherited

Get the region object that defines the size and starting index for the largest possible region this image could represent. This is used in determining how much memory would be needed to load an entire dataset. It is also used to determine boundary true conditions.

See Also
ImageRegion, GetBufferedRegion(), GetRequestedRegion()

Reimplemented in itk::ImageAdaptor< TImage, TAccessor >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, otb::Accessor::VectorImageToASPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ShiftScalePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexConjugatePixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >.

Definition at line 252 of file itkImageBase.h.

Referenced by itk::DiffusionTensor3DReconstructionImageFilter< TReferenceImagePixelType, TGradientImagePixelType, TTensorPixelType, TMaskImageType >::BeforeThreadedGenerateData(), itk::Octree< TPixel, ColorTableSize, MappingFunctionType >::BuildFromImage(), itk::BSplineControlPointImageFilter< TInputImage, TOutputImage >::CollapsePhiLattice(), itk::BSplineScatteredDataPointSetToImageFilter< TInputPointSet, TOutputImage >::CollapsePhiLattice(), itk::VelocityFieldTransform< TScalar, NDimensions >::CopyDisplacementField(), itk::ConstantVelocityFieldTransform< TScalar, NDimensions >::CopyDisplacementField(), itk::ImageBase< VImageDimension >::CopyInformation(), itk::MRIBiasFieldCorrectionFilter< TInputImage, TOutputImage, TMaskImage >::ExpImage(), itk::GaussianExponentialDiffeomorphicTransform< TScalar, NDimensions >::GaussianSmoothConstantVelocityField(), itk::GaussianSmoothingOnUpdateDisplacementFieldTransform< TScalar, NDimensions >::GaussianSmoothDisplacementField(), itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType, TTransformPrecisionType >::GenerateOutputInformation(), itk::watershed::Relabeler< TScalar, TImageDimension >::GraftNthOutput(), itk::FastMarchingImageFilter< TLevelSet, TSpeedImage >::SetBinaryMask(), otb::VectorDataToLabelImageFilter< TVectorData, TOutputImage >::SetOutputParametersFromImage(), itk::TransformToDisplacementFieldSource< TOutputImage, TTransformPrecisionType >::SetOutputParametersFromImage(), itk::TransformToDeformationFieldSource< TOutputImage, TTransformPrecisionType >::SetOutputParametersFromImage(), otb::StreamingResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >::SetOutputParametersFromImage(), otb::WarpImageFilter< TInputImage, TOutputImage, TDisplacementField >::SetOutputParametersFromImage(), itk::WarpImageFilter< TInputImage, TOutputImage, TDisplacementField >::SetOutputParametersFromImage(), itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType, TTransformPrecisionType >::SetOutputParametersFromImage(), itk::N4BiasFieldCorrectionImageFilter< TInputImage, TMaskImage, TOutputImage >::SharpenImage(), itk::PhasedArray3DSpecialCoordinatesImage< TPixel >::TransformContinuousIndexToPhysicalPoint(), itk::PhasedArray3DSpecialCoordinatesImage< TPixel >::TransformIndexToPhysicalPoint(), itk::PhasedArray3DSpecialCoordinatesImage< TPixel >::TransformPhysicalPointToContinuousIndex(), itk::ImageBase< TImage::ImageDimension >::TransformPhysicalPointToContinuousIndex(), itk::PhasedArray3DSpecialCoordinatesImage< TPixel >::TransformPhysicalPointToIndex(), itk::ImageBase< TImage::ImageDimension >::TransformPhysicalPointToIndex(), and itk::N4BiasFieldCorrectionImageFilter< TInputImage, TMaskImage, TOutputImage >::UpdateBiasFieldEstimate().

virtual VectorType otb::VectorImage< TNeuron::ComponentType , VImageDimension >::GetLowerLeftCorner ( void  ) const
virtualinherited
virtual VectorType otb::VectorImage< TNeuron::ComponentType , VImageDimension >::GetLowerRightCorner ( void  ) const
virtualinherited
MetaDataDictionary & itk::Object::GetMetaDataDictionary ( void  )
inherited
const MetaDataDictionary & itk::Object::GetMetaDataDictionary ( void  ) const
inherited
Returns
A constant reference to this objects MetaDataDictionary.

Definition at line 548 of file itkObject.cxx.

References NULL.

ModifiedTimeType itk::Object::GetMTime ( void  ) const
virtualinherited

Return this objects modified time.

Return the modification for this object.

Reimplemented in itk::ImageAdaptor< TImage, TAccessor >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, otb::Accessor::VectorImageToASPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ShiftScalePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexConjugatePixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType, TTransformPrecisionType >, itk::MultiResolutionImageRegistrationMethod< TFixedImage, TMovingImage >, itk::SpatialObject< VDimension >, itk::SpatialObject< 3 >, itk::SpatialObject< TDimension >, itk::SpatialObject< TMesh::PointDimension >, itk::VectorResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::ImageRegistrationMethod< TFixedImage, TMovingImage >, itk::ImageToSpatialObjectRegistrationMethod< TFixedImage, TMovingSpatialObject >, itk::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >, itk::TransformToDeformationFieldSource< TOutputImage, TTransformPrecisionType >, itk::BoundingBox< TPointIdentifier, VPointDimension, TCoordRep, TPointsContainer >, itk::InverseDisplacementFieldImageFilter< TInputImage, TOutputImage >, itk::PointSetToImageRegistrationMethod< TFixedPointSet, TMovingImage >, itk::TransformToDisplacementFieldSource< TOutputImage, TTransformPrecisionType >, itk::PointSetToPointSetRegistrationMethod< TFixedPointSet, TMovingPointSet >, itk::DeformationFieldSource< TOutputImage >, itk::LandmarkDisplacementFieldSource< TOutputImage >, itk::ImageSpatialObject< TDimension, TPixelType >, itk::ImageSpatialObject< TDimension, unsigned char >, itk::MeshSpatialObject< TMesh >, and itk::SceneSpatialObject< TSpaceDimension >.

Definition at line 283 of file itkObject.cxx.

Referenced by itk::LandmarkDisplacementFieldSource< TOutputImage >::GetMTime(), itk::DeformationFieldSource< TOutputImage >::GetMTime(), itk::TransformToDisplacementFieldSource< TOutputImage, TTransformPrecisionType >::GetMTime(), itk::InverseDisplacementFieldImageFilter< TInputImage, TOutputImage >::GetMTime(), itk::BoundingBox< TPointIdentifier, VPointDimension, TCoordRep, TPointsContainer >::GetMTime(), itk::TransformToDeformationFieldSource< TOutputImage, TTransformPrecisionType >::GetMTime(), itk::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >::GetMTime(), itk::VectorResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >::GetMTime(), itk::SpatialObject< VDimension >::GetMTime(), itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType, TTransformPrecisionType >::GetMTime(), itk::SpatialObject< TMesh::PointDimension >::GetObjectMTime(), and itk::ProcessObject::UpdateOutputInformation().

virtual const char* otb::VectorImage< TNeuron::ComponentType , VImageDimension >::GetNameOfClass ( ) const
virtualinherited

Run-time type information (and related methods).

Reimplemented from itk::VectorImage< TNeuron::ComponentType, VImageDimension >.

NeighborhoodAccessorFunctorType otb::VectorImage< TNeuron::ComponentType , VImageDimension >::GetNeighborhoodAccessor ( )
inlineinherited

Return the Pixel Accessor object Return the Pixel Accesor object Return the NeighborhoodAccessor functor

Definition at line 161 of file otbVectorImage.h.

const NeighborhoodAccessorFunctorType otb::VectorImage< TNeuron::ComponentType , VImageDimension >::GetNeighborhoodAccessor ( ) const
inlineinherited

Return the NeighborhoodAccessor functor

Definition at line 167 of file otbVectorImage.h.

virtual unsigned int itk::VectorImage< TNeuron::ComponentType , VImageDimension >::GetNumberOfComponentsPerPixel ( ) const
virtualinherited

Get/Set the number of components each pixel has, ie the VectorLength

Reimplemented from itk::ImageBase< VImageDimension >.

virtual const std::string& itk::Object::GetObjectName ( )
virtualinherited
template<unsigned int VImageDimension = 2>
const OffsetValueType* itk::ImageBase< VImageDimension >::GetOffsetTable ( ) const
inlineinherited

Get the offset table. The offset table gives increments for moving from one pixel to next in the current row, column, slice, etc.. This table if of size [VImageDimension+1], because its values are computed progressively as: {1, N1, N1*N2, N1*N2*N3,...,(N1*...*Nn)} Where the values {N1,...,Nn} are the elements of the BufferedRegion::Size array. The last element of the OffsetTable is equivalent to the BufferSize. Having a [VImageDimension+1] size array, simplifies the implementation of some data accessing algorithms. The entries in the offset table are only valid after the BufferedRegion is set.

Definition at line 320 of file itkImageBase.h.

template<unsigned int VImageDimension = 2>
virtual const PointType& itk::ImageBase< VImageDimension >::GetOrigin ( )
virtualinherited

Get the origin of the image. The origin is the geometric coordinates of the index (0,0). The value returned is a Point<double, VImageDimension>. For ImageBase and Image, the default origin is 0.

Reimplemented in itk::ImageAdaptor< TImage, TAccessor >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, otb::Accessor::VectorImageToASPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ShiftScalePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexConjugatePixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >.

Referenced by itk::DiffusionTensor3DReconstructionImageFilter< TReferenceImagePixelType, TGradientImagePixelType, TTensorPixelType, TMaskImageType >::BeforeThreadedGenerateData(), itk::VelocityFieldTransform< TScalar, NDimensions >::CopyDisplacementField(), itk::ConstantVelocityFieldTransform< TScalar, NDimensions >::CopyDisplacementField(), itk::ImageBase< VImageDimension >::CopyInformation(), itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType, TTransformPrecisionType >::GenerateOutputInformation(), otb::VectorDataToLabelImageFilter< TVectorData, TOutputImage >::SetOutputParametersFromImage(), itk::TransformToDisplacementFieldSource< TOutputImage, TTransformPrecisionType >::SetOutputParametersFromImage(), itk::TransformToDeformationFieldSource< TOutputImage, TTransformPrecisionType >::SetOutputParametersFromImage(), otb::StreamingResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >::SetOutputParametersFromImage(), otb::WarpImageFilter< TInputImage, TOutputImage, TDisplacementField >::SetOutputParametersFromImage(), itk::WarpImageFilter< TInputImage, TOutputImage, TDisplacementField >::SetOutputParametersFromImage(), itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType, TTransformPrecisionType >::SetOutputParametersFromImage(), and itk::N4BiasFieldCorrectionImageFilter< TInputImage, TMaskImage, TOutputImage >::UpdateBiasFieldEstimate().

virtual const ModifiedTimeType& itk::DataObject::GetPipelineMTime ( )
virtualinherited
const PixelType itk::VectorImage< TNeuron::ComponentType , VImageDimension >::GetPixel ( const IndexType index) const
inlineinherited

Get a pixel (read only version).

For efficiency, this function does not check that the image has actually been allocated yet. Note that the method returns a pixel on the stack.

Definition at line 231 of file itkVectorImage.h.

PixelType itk::VectorImage< TNeuron::ComponentType , VImageDimension >::GetPixel ( const IndexType index)
inlineinherited

Get a "reference" to a pixel. This result cannot be used as an lvalue because the pixel is converted on the fly to a VariableLengthVector.

To use the results to modify this image, return value optimization must be relied upon.

For efficiency, this function does not check that the image has actually been allocated yet.

Definition at line 249 of file itkVectorImage.h.

AccessorType itk::VectorImage< TNeuron::ComponentType , VImageDimension >::GetPixelAccessor ( void  )
inlineinherited

Return the Pixel Accessor object

Definition at line 309 of file itkVectorImage.h.

const AccessorType itk::VectorImage< TNeuron::ComponentType , VImageDimension >::GetPixelAccessor ( void  ) const
inlineinherited

Return the Pixel Accesor object

Definition at line 312 of file itkVectorImage.h.

PixelContainer* itk::VectorImage< TNeuron::ComponentType , VImageDimension >::GetPixelContainer ( )
inlineinherited

Return a pointer to the container.

Definition at line 287 of file itkVectorImage.h.

const PixelContainer* itk::VectorImage< TNeuron::ComponentType , VImageDimension >::GetPixelContainer ( ) const
inlineinherited

Return a pointer to the container.

Definition at line 290 of file itkVectorImage.h.

virtual std::string otb::VectorImage< TNeuron::ComponentType , VImageDimension >::GetProjectionRef ( void  ) const
virtualinherited

Get the projection coordinate system of the image.

virtual const RealTimeStamp& itk::DataObject::GetRealTimeStamp ( )
virtualinherited
virtual int itk::LightObject::GetReferenceCount ( ) const
inlinevirtualinherited

Gets the reference count on this object.

Definition at line 112 of file itkLightObject.h.

virtual const bool& itk::DataObject::GetReleaseDataFlag ( )
virtualinherited
template<unsigned int VImageDimension = 2>
virtual const RegionType& itk::ImageBase< VImageDimension >::GetRequestedRegion ( ) const
inlinevirtualinherited

Get the region object that defines the size and starting index for the region of the image requested (i.e., the region of the image to be operated on by a filter).

See Also
ImageRegion, SetLargestPossibleRegion(), SetBufferedRegion()

Reimplemented in itk::ImageAdaptor< TImage, TAccessor >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, otb::Accessor::VectorImageToASPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ShiftScalePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexConjugatePixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >.

Definition at line 288 of file itkImageBase.h.

Referenced by itk::SparseFieldFourthOrderLevelSetImageFilter< TInputImage, TOutputImage >::ComputeCurvatureTarget(), otb::PipelineMemoryPrintCalculator::EvaluateDataObjectPrint(), itk::watershed::EquivalenceRelabeler< TScalar, TImageDimension >::GenerateInputRequestedRegion(), itk::watershed::Relabeler< TScalar, TImageDimension >::GraftNthOutput(), itk::FastMarchingExtensionImageFilter< TLevelSet, TAuxValue, VAuxDimension, TSpeedImage >::Initialize(), itk::FastMarchingExtensionImageFilterBase< TInput, TOutput, TAuxValue, VAuxDimension >::InitializeOutput(), itk::MRIBiasFieldCorrectionFilter< TInputImage, TOutputImage, TMaskImage >::Log1PImage(), otb::CumulantsForEdgeworth< TInput >::MakeSumAndMoments(), and itk::ImageBase< VImageDimension >::SetRequestedRegion().

SmartPointerForwardReference< ProcessObject > itk::DataObject::GetSource ( void  ) const
inherited

Get the process object that generated this data object. If there is no process object, then the data object has been disconnected from the pipeline, or the data object was created manually. (Note: we cannot use the GetObjectMacro() defined in itkMacro because the mutual dependency of DataObject and ProcessObject causes compile problems. Also, a forward reference smart pointer is returned, not a smart pointer, because of the circular dependency between the process and data object.)

GetSource() returns a SmartPointerForwardReference and not a WeakPointer because it is assumed the code calling GetSource() wants to hold a long term reference to the source.

Definition at line 292 of file itkDataObject.cxx.

Referenced by otb::PipelineMemoryPrintCalculator::EvaluateProcessObjectPrintRecursive().

DataObject::DataObjectPointerArraySizeType itk::DataObject::GetSourceOutputIndex ( ) const
inherited
const DataObject::DataObjectIdentifierType & itk::DataObject::GetSourceOutputName ( ) const
inherited

Which of the source's outputs corresponds to this data object?

Definition at line 300 of file itkDataObject.cxx.

template<unsigned int VImageDimension = 2>
virtual const SpacingType& itk::ImageBase< VImageDimension >::GetSpacing ( )
virtualinherited

Get the spacing (size of a pixel) `of the image. The spacing is the geometric distance between image samples along each dimension. The value returned is a Vector<double, VImageDimension>. For ImageBase and Image, the default data spacing is unity.

Reimplemented in itk::ImageAdaptor< TImage, TAccessor >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, otb::Accessor::VectorImageToASPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ShiftScalePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexConjugatePixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >.

Referenced by itk::DiffusionTensor3DReconstructionImageFilter< TReferenceImagePixelType, TGradientImagePixelType, TTensorPixelType, TMaskImageType >::BeforeThreadedGenerateData(), itk::VelocityFieldTransform< TScalar, NDimensions >::CopyDisplacementField(), itk::ConstantVelocityFieldTransform< TScalar, NDimensions >::CopyDisplacementField(), itk::ImageBase< VImageDimension >::CopyInformation(), itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, TFunction >::GenerateOutputInformation(), itk::JoinSeriesImageFilter< TInputImage, TOutputImage >::GenerateOutputInformation(), otb::MultiChannelsPolarimetricSynthesisFilter< TInputImage, TOutputImage, TFunction >::GenerateOutputInformation(), itk::ExtractImageFilter< TInputImage, TOutputImage >::GenerateOutputInformation(), itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType, TTransformPrecisionType >::GenerateOutputInformation(), itk::LevelSetSparseImage< TOutput, VDimension >::SetLabelMap(), otb::VectorDataToLabelImageFilter< TVectorData, TOutputImage >::SetOutputParametersFromImage(), itk::TransformToDisplacementFieldSource< TOutputImage, TTransformPrecisionType >::SetOutputParametersFromImage(), itk::TransformToDeformationFieldSource< TOutputImage, TTransformPrecisionType >::SetOutputParametersFromImage(), otb::StreamingResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >::SetOutputParametersFromImage(), otb::WarpImageFilter< TInputImage, TOutputImage, TDisplacementField >::SetOutputParametersFromImage(), itk::WarpImageFilter< TInputImage, TOutputImage, TDisplacementField >::SetOutputParametersFromImage(), itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType, TTransformPrecisionType >::SetOutputParametersFromImage(), and itk::N4BiasFieldCorrectionImageFilter< TInputImage, TMaskImage, TOutputImage >::UpdateBiasFieldEstimate().

const TimeStamp & itk::Object::GetTimeStamp ( ) const
virtualinherited

Return this object's time stamp.

Return the modification for this object.

Reimplemented in itk::RealTimeClock.

Definition at line 293 of file itkObject.cxx.

Referenced by itk::RealTimeClock::GetTimeStamp().

ModifiedTimeType itk::DataObject::GetUpdateMTime ( ) const
virtualinherited

MTime for the last time this DataObject was generated.

Definition at line 452 of file itkDataObject.cxx.

virtual VectorType otb::VectorImage< TNeuron::ComponentType , VImageDimension >::GetUpperLeftCorner ( void  ) const
virtualinherited

Get image corners.

virtual VectorType otb::VectorImage< TNeuron::ComponentType , VImageDimension >::GetUpperRightCorner ( void  ) const
virtualinherited
virtual const VectorLengthType& itk::VectorImage< TNeuron::ComponentType , VImageDimension >::GetVectorLength ( )
virtualinherited
template<class TNeuron , class TDistance , unsigned int VMapDimension>
SOMMap< TNeuron, TDistance, VMapDimension >::IndexType otb::SOMMap< TNeuron, TDistance, VMapDimension >::GetWinner ( const NeuronType sample)

Get The index of the winning neuron for a sample.

Parameters
samplethe sample.
Returns
The index of the winning neuron.

Get The index of the winning neuron for a sample.

Parameters
sampleThe sample
Returns
The index of the winning neuron.

Definition at line 51 of file otbSOMMap.txx.

static void itk::DataObject::GlobalReleaseDataFlagOff ( )
inlinestaticinherited

Definition at line 340 of file itkDataObject.h.

static void itk::DataObject::GlobalReleaseDataFlagOn ( )
inlinestaticinherited

Definition at line 338 of file itkDataObject.h.

static void itk::Object::GlobalWarningDisplayOff ( )
inlinestaticinherited

Definition at line 118 of file itkObject.h.

Referenced by itk::OutputWindow::DisplayText().

static void itk::Object::GlobalWarningDisplayOn ( )
inlinestaticinherited

Definition at line 116 of file itkObject.h.

virtual void itk::VectorImage< TNeuron::ComponentType , VImageDimension >::Graft ( const DataObject data)
virtualinherited

Graft the data and information from one image to another. This is a convenience method to setup a second image with all the meta information of another image and use the same pixel container. Note that this method is different than just using two SmartPointers to the same image since separate DataObjects are still maintained. This method is similar to ImageSource::GraftOutput(). The implementation in ImageBase simply calls CopyInformation() and copies the region ivars. The implementation here refers to the superclass' implementation and then copies over the pixel container.

Reimplemented from itk::ImageBase< VImageDimension >.

bool itk::Object::HasObserver ( const EventObject event) const
inherited

Return true if an observer is registered for this event.

Definition at line 472 of file itkObject.cxx.

virtual void itk::VectorImage< TNeuron::ComponentType , VImageDimension >::Initialize ( void  )
virtualinherited

Restore the data object to its initial state. This means releasing memory.

Reimplemented from itk::ImageBase< VImageDimension >.

template<unsigned int VImageDimension>
void itk::ImageBase< VImageDimension >::InitializeBufferedRegion ( void  )
protectedvirtualinherited

Restores the buffered region to it's default state This method does not call Modify because Initialization is called by ReleaseData and can not modify the MTime

See Also
ReleaseData, Initialize, SetBufferedRegion

Definition at line 446 of file itkImageBase.hxx.

LightObject::Pointer itk::LightObject::InternalClone ( ) const
protectedvirtualinherited
void itk::Object::InvokeEvent ( const EventObject event)
inherited
void itk::Object::InvokeEvent ( const EventObject event) const
inherited

Call Execute on all the Commands observing this event id. The actions triggered by this call doesn't modify this object.

Definition at line 462 of file itkObject.cxx.

itk::LightObject::itkCloneMacro ( Self  )
inherited
void itk::Object::Modified ( void  ) const
virtualinherited

Update the modification time for this object. Many filters rely on the modification time to determine if they need to recompute their data.

Make sure this object's modified time is greater than all others.

Reimplemented in otb::SVMModel< TValue, TLabel >, itk::ImageAdaptor< TImage, TAccessor >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, otb::Accessor::VectorImageToASPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ShiftScalePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexConjugatePixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >, otb::SurfaceAdjacencyEffect6SCorrectionSchemeFilter< TInputImage, TOutputImage >, otb::GenericRSTransform< TScalarType, NInputDimensions, NOutputDimensions >, itk::GPUImage< TPixel, VImageDimension >, otb::MeanShiftImageFilter< TInputImage, TOutputImage, TLabeledOutput, TBufferConverter >, otb::MeanShiftImageFilter< TInputImage, TOutputImage, TLabeledOutput, MeanShift::VectorBufferConverter >, otb::GCPsToRPCSensorModelImageFilter< TImage >, otb::Polygon< TValue >, otb::ImageRegionAdaptativeSplitter< VImageDimension >, itk::GrayscaleErodeImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalClosingImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleDilateImageFilter< TInputImage, TOutputImage, TKernel >, otb::GenericInterpolateImageFunction< TInputImage, TFunction, TBoundaryCondition, TCoordRep >, itk::MorphologicalGradientImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalOpeningImageFilter< TInputImage, TOutputImage, TKernel >, otb::PolyLineParametricPathWithValue< TValue, VDimension >, otb::PolyLineParametricPathWithValue< TValue, 2 >, otb::PhysicalToRPCSensorModelImageFilter< TImage >, itk::NormalizeImageFilter< TInputImage, TOutputImage >, and otb::StatisticsXMLFileReader< TMeasurementVector >.

Definition at line 312 of file itkObject.cxx.

Referenced by itk::AttributeSelectionLabelMapFilter< TImage, Functor::LabelLabelObjectAccessor< TImage::LabelObjectType > >::AddAttribute(), itk::Function::ConvergenceMonitoringFunction< TScalar, TScalar >::AddEnergyValue(), otb::Wrapper::InputImageListParameter::AddFromFileName(), otb::Wrapper::InputVectorDataListParameter::AddFromFileName(), otb::Wrapper::InputFilenameListParameter::AddFromFileName(), otb::Wrapper::InputImageListParameter::AddImage(), otb::Wrapper::InputImageListParameter::AddNullElement(), otb::Wrapper::InputVectorDataListParameter::AddNullElement(), otb::Wrapper::InputFilenameListParameter::AddNullElement(), otb::Wrapper::StringListParameter::AddNullElement(), itk::ConnectedRegionsMeshFilter< TInputMesh, TOutputMesh >::AddSeed(), itk::ConnectedRegionsMeshFilter< TInputMesh, TOutputMesh >::AddSpecifiedRegion(), otb::Wrapper::InputVectorDataListParameter::AddVectorData(), itk::PolyLineParametricPath< VDimension >::AddVertex(), itk::ChainCodePath< 2 >::ChangeStep(), itk::ChainCodePath2D::ChangeStep(), itk::FourierSeriesPath< VDimension >::Clear(), itk::HilbertPath< TIndexValue, VDimension >::Clear(), itk::ChainCodePath< 2 >::Clear(), itk::ChainCodePath2D::Clear(), itk::AttributeSelectionLabelMapFilter< TImage, Functor::LabelLabelObjectAccessor< TImage::LabelObjectType > >::ClearAttributeSet(), itk::Function::ConvergenceMonitoringFunction< TScalar, TScalar >::ClearEnergyValues(), itk::MultiTransform< TScalar, NDimensions >::ClearTransformQueue(), otb::Wrapper::InputFilenameListParameter::ClearValue(), otb::Wrapper::InputImageListParameter::ClearValue(), otb::Wrapper::InputVectorDataListParameter::ClearValue(), otb::Wrapper::InputFilenameListParameter::Erase(), otb::Wrapper::InputImageListParameter::Erase(), otb::Wrapper::InputVectorDataListParameter::Erase(), itk::ConnectedRegionsMeshFilter< TInputMesh, TOutputMesh >::InitializeSeedList(), itk::ConnectedRegionsMeshFilter< TInputMesh, TOutputMesh >::InitializeSpecifiedRegionList(), itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >::InsertNarrowBandNode(), itk::ChainCodePath2D::InsertStep(), itk::ChainCodePath< 2 >::InsertStep(), otb::ogr::ImageReference< double >::Modified(), itk::MultiTransform< TScalar, NDimensions >::PopBackTransform(), itk::MultiTransform< TScalar, NDimensions >::PopFrontTransform(), itk::MultiTransform< TScalar, NDimensions >::PushBackTransform(), itk::MultiTransform< TScalar, NDimensions >::PushFrontTransform(), itk::Statistics::SubsamplerBase< TSample >::RequestMaximumNumberOfResults(), itk::AdaptImageFilter< TInputImage, TOutputImage, TAccessor >::SetAccessor(), itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetAdvectionScaling(), itk::FastMarchingImageFilter< TLevelSet, TSpeedImage >::SetAlivePoints(), itk::CompositeTransform< TScalar, NDimensions >::SetAllTransformsToOptimize(), itk::GaussianInterpolateImageFunction< TInputImage, TCoordRep >::SetAlpha(), itk::WeightedAddImageFilter< TInputImage1, TInputImage2, TOutputImage >::SetAlpha(), itk::SigmoidImageFilter< TInputImage, TOutputImage >::SetAlpha(), itk::AttributeSelectionLabelMapFilter< TImage, Functor::LabelLabelObjectAccessor< TImage::LabelObjectType > >::SetAttributeSet(), itk::LevelSetVelocityNeighborhoodExtractor< TLevelSet, TAuxValue, VAuxDimension >::SetAuxImage(), itk::SigmoidImageFilter< TInputImage, TOutputImage >::SetBeta(), itk::FastMarchingImageFilter< TLevelSet, TSpeedImage >::SetBinaryMask(), otb::TileMapImageIO::SetCacheDirectory(), itk::MatrixOffsetTransformBase< TScalar, 3, 3 >::SetCenter(), itk::ConnectedRegionsMeshFilter< TInputMesh, TOutputMesh >::SetClosestPoint(), itk::ConstantPadImageFilter< TInputImage, TOutputImage >::SetConstant(), itk::DivideOrZeroOutImageFilter< TInputImage1, TInputImage2, TOutputImage >::SetConstant(), itk::LBFGSBOptimizer::SetCostFunction(), itk::VectorThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetCovariance(), itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetCurvatureScaling(), itk::CurvesLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetDerivativeSigma(), itk::NarrowBandCurvesLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetDerivativeSigma(), itk::GeodesicActiveContourLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetDerivativeSigma(), itk::GeodesicActiveContourShapePriorLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetDerivativeSigma(), otb::ImageIOBase::SetDimensions(), itk::ImageIOBase::SetDimensions(), otb::ImageIOBase::SetDirection(), itk::ImageIOBase::SetDirection(), itk::ExtractImageFilter< TInputImage, TOutputImage >::SetDirectionCollapseToStrategy(), itk::ComposeDisplacementFieldsImageFilter< TInputImage, TOutputImage >::SetDisplacementField(), itk::InvertDisplacementFieldImageFilter< TInputImage, TOutputImage >::SetDisplacementField(), itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetEdgeWeight(), itk::NarrowBandThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetEdgeWeight(), itk::watershed::Boundary< TScalar, TDimension >::SetFace(), itk::ExpNegativeImageFilter< TInputImage, TOutputImage >::SetFactor(), itk::FileListVideoIO::SetFileName(), itk::AnisotropicDiffusionImageFilter< TInputImage, TOutputImage >::SetFixedAverageGradientMagnitude(), itk::watershed::Boundary< TScalar, TDimension >::SetFlatHash(), itk::NaryFunctorImageFilter< TInputImage, TOutputImage, Functor::Maximum1< TInputImage::PixelType, TInputImage::PixelType > >::SetFunctor(), itk::UnaryFunctorImageFilter< TInputImage, TOutputImage, Functor::ReciprocalHAlphaFunctor< TInputImage::PixelType, TOutputImage::PixelType > >::SetFunctor(), itk::HistogramToImageFilter< THistogram, TImage, Function::HistogramIntensityFunction< SizeValueType, TImage::PixelType > >::SetFunctor(), itk::TernaryFunctorImageFilter< TInputMultiSpectralImage, TInputMultiSpectralInterpImage, TInputPanchroImage, TOutputImage, TFunctor >::SetFunctor(), itk::ConnectedComponentFunctorImageFilter< TInputImage, TOutputImage, Functor::SimilarVectorsFunctor< TInputImage::ValueType >, TMaskImage >::SetFunctor(), itk::BinaryFunctorImageFilter< TInputImage1, TInputImage2, TOutputImage, Functor::DivideOrZeroOut< TInputImage1::PixelType, TInputImage2::PixelType, TOutputImage::PixelType > >::SetFunctor(), itk::ImageMomentsCalculator< TImage >::SetImage(), otb::Wrapper::InputImageListParameter::SetImageList(), itk::VectorIndexSelectionCastImageFilter< TInputImage, TOutputImage >::SetIndex(), itk::MatrixIndexSelectionImageFilter< TInputImage, TOutputImage >::SetIndices(), itk::TriangleMeshToBinaryImageFilter< TInputMesh, TOutputImage >::SetInfoImage(), itk::MRIBiasFieldCorrectionFilter< TInputImage, TOutputImage, TMaskImage >::SetInitialBiasFieldCoefficients(), itk::AmoebaOptimizer::SetInitialSimplexDelta(), itk::HistogramAlgorithmBase< THistogram >::SetInputHistogram(), otb::HistogramStatisticsFunction< TInputHistogram, TOutput >::SetInputHistogram(), otb::ImageToGenericRSOutputParameters< TImage >::SetInputKeywordList(), itk::LabelVotingImageFilter< TInputImage, TOutputImage >::SetLabelForUndecidedPixels(), itk::MultiLabelSTAPLEImageFilter< TInputImage, TOutputImage, TWeights >::SetLabelForUndecidedPixels(), itk::watershed::Segmenter< InputImageType >::SetLargestPossibleRegion(), itk::TemporalDataObject::SetLargestPossibleTemporalRegion(), otb::Wrapper::InputImageListParameter::SetListFromFileName(), otb::Wrapper::InputVectorDataListParameter::SetListFromFileName(), otb::Wrapper::InputFilenameListParameter::SetListFromFileName(), itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetLowerThreshold(), itk::NarrowBandThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetLowerThreshold(), itk::MaskNegatedImageFilter< TInputImage, TMaskImage, TOutputImage >::SetMaskingValue(), itk::MaskImageFilter< TInputImage, TMaskImage, TOutputImage >::SetMaskingValue(), itk::MatrixOffsetTransformBase< TScalar, 3, 3 >::SetMatrix(), itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetMaximumCurvatureTimeStep(), itk::watershed::SegmentTable< TScalar >::SetMaximumDepth(), itk::DiscreteGaussianImageFilter< TInputImage, TOutputImage >::SetMaximumError(), itk::CannyEdgeDetectionImageFilter< ImageType, ImageType >::SetMaximumError(), itk::MultiLabelSTAPLEImageFilter< TInputImage, TOutputImage, TWeights >::SetMaximumNumberOfIterations(), itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetMaximumPropagationTimeStep(), itk::VectorThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetMean(), itk::Statistics::MembershipFunctionBase< TMeasurementVector >::SetMeasurementVectorSize(), itk::Statistics::DistanceMetric< Array< double > >::SetMeasurementVectorSize(), itk::Statistics::Sample< ImageJointDomainTraits< TImage >::MeasurementVectorType >::SetMeasurementVectorSize(), itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >::SetNarrowBand(), itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >::SetNarrowBandInnerRadius(), itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType, TInputImage::ImageDimension > >::SetNarrowBandTotalRadius(), itk::OpenCVVideoIO::SetNextFrameToRead(), itk::VXLVideoIO::SetNextFrameToRead(), otb::Wrapper::InputImageListParameter::SetNthFileName(), otb::Wrapper::InputVectorDataListParameter::SetNthFileName(), otb::Wrapper::InputFilenameListParameter::SetNthFileName(), itk::CompositeTransform< TScalar, NDimensions >::SetNthTransformToOptimize(), otb::ImageIOBase::SetNumberOfDimensions(), itk::ImageIOBase::SetNumberOfDimensions(), itk::SparseFieldFourthOrderLevelSetImageFilter< TInputImage, TOutputImage >::SetNumberOfLayers(), itk::Statistics::UniformRandomSpatialNeighborSubsampler< TSample, TRegion >::SetNumberOfResultsRequested(), itk::FastMarchingReachedTargetNodesStoppingCriterion< TInput, TOutput >::SetNumberOfTargetsToBeReached(), itk::MatrixOffsetTransformBase< TScalar, 3, 3 >::SetOffset(), itk::NeighborhoodOperatorImageFunction< TInputImage, TOutput >::SetOperator(), itk::VectorNeighborhoodOperatorImageFilter< TInputImage, TOutputImage >::SetOperator(), itk::NeighborhoodOperatorImageFilter< TInputImage, TOutputImage, TOperatorValueType >::SetOperator(), otb::ImageIOBase::SetOrigin(), itk::ImageIOBase::SetOrigin(), itk::SigmoidImageFilter< TInputImage, TOutputImage >::SetOutputMaximum(), itk::SigmoidImageFilter< TInputImage, TOutputImage >::SetOutputMinimum(), otb::ImageToGenericRSOutputParameters< TImage >::SetOutputProjectionRef(), itk::FastMarchingImageFilter< TLevelSet, TSpeedImage >::SetOutsidePoints(), itk::MaskNegatedImageFilter< TInputImage, TMaskImage, TOutputImage >::SetOutsideValue(), itk::MaskImageFilter< TInputImage, TMaskImage, TOutputImage >::SetOutsideValue(), otb::MapProjectionAdapter::SetParameter(), itk::Statistics::ProbabilityDistribution::SetParameters(), itk::DisplacementFieldTransform< TScalar, NDimensions >::SetParameters(), itk::FFTWHalfHermitianToRealInverseFFTImageFilter< TInputImage, TOutputImage >::SetPlanRigor(), itk::FFTWInverseFFTImageFilter< TInputImage, TOutputImage >::SetPlanRigor(), itk::FFTWForwardFFTImageFilter< TInputImage, TOutputImage >::SetPlanRigor(), itk::FFTWRealToHalfHermitianForwardFFTImageFilter< TInputImage, TOutputImage >::SetPlanRigor(), itk::MultiLabelSTAPLEImageFilter< TInputImage, TOutputImage, TWeights >::SetPriorProbabilities(), itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetPropagationScaling(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetRealThresholds(), itk::ChangeInformationImageFilter< TInputImage >::SetReferenceImage(), itk::ImportImageFilter< TPixel, VImageDimension >::SetRegion(), itk::BinaryMask3DMeshSource< TInputImage, TOutputMesh >::SetRegionOfInterest(), itk::ScaleTransform< TScalar, NDimensions >::SetScale(), itk::CollidingFrontsImageFilter< TInputImage, TOutputImage >::SetSeedPoints1(), itk::CollidingFrontsImageFilter< TInputImage, TOutputImage >::SetSeedPoints2(), itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetSegmentationFunction(), itk::ShapePriorSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetShapePriorScaling(), itk::ImageRegistrationMethodv4< TFixedImage, TMovingImage, TOutputTransform >::SetShrinkFactorsPerDimension(), itk::GaussianInterpolateImageFunction< TInputImage, TCoordRep >::SetSigma(), itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetSmoothingConductance(), itk::NarrowBandThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetSmoothingConductance(), itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetSmoothingIterations(), itk::NarrowBandThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetSmoothingIterations(), itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetSmoothingTimeStep(), itk::NarrowBandThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetSmoothingTimeStep(), itk::PowellOptimizer::SetSpaceDimension(), otb::ImageIOBase::SetSpacing(), itk::ImageIOBase::SetSpacing(), itk::SpatialObject< TMesh::PointDimension >::SetSpacing(), itk::ImageMomentsCalculator< TImage >::SetSpatialObjectMask(), itk::FastMarchingImageFilter< TLevelSet, TSpeedImage >::SetSpeedConstant(), itk::FastMarchingReachedTargetNodesStoppingCriterion< TInput, TOutput >::SetTargetCondition(), itk::FastMarchingReachedTargetNodesStoppingCriterion< TInput, TOutput >::SetTargetNodes(), itk::FastMarchingUpwindGradientImageFilter< TLevelSet, TSpeedImage >::SetTargetPoints(), itk::MultiLabelSTAPLEImageFilter< TInputImage, TOutputImage, TWeights >::SetTerminationUpdateThreshold(), itk::DivideOrZeroOutImageFilter< TInputImage1, TInputImage2, TOutputImage >::SetThreshold(), itk::VectorThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetThreshold(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetThresholds(), itk::MatrixOffsetTransformBase< TScalar, 3, 3 >::SetTranslation(), itk::FastMarchingImageFilter< TLevelSet, TSpeedImage >::SetTrialPoints(), itk::ThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetUpperThreshold(), itk::NarrowBandThresholdSegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetUpperThreshold(), itk::Statistics::UniformRandomSpatialNeighborSubsampler< TSample, TRegion >::SetUseClockForSeed(), itk::SegmentationLevelSetImageFilter< TInputImage, TFeatureImage, TOutputPixelType >::SetUseMinimalCurvature(), itk::watershed::Boundary< TScalar, TDimension >::SetValid(), otb::Wrapper::OutputProcessXMLParameter::SetValue(), otb::Wrapper::InputProcessXMLParameter::SetValue(), otb::Wrapper::InputFilenameParameter::SetValue(), otb::Wrapper::OutputFilenameParameter::SetValue(), otb::Wrapper::ListViewParameter::SetValue(), otb::Wrapper::ChoiceParameter::SetValue(), itk::DiscreteGaussianImageFilter< TInputImage, TOutputImage >::SetVariance(), itk::CannyEdgeDetectionImageFilter< ImageType, ImageType >::SetVariance(), otb::Wrapper::InputVectorDataListParameter::SetVectorDataList(), otb::MapProjectionAdapter::SetWkt(), itk::LabelVotingImageFilter< TInputImage, TOutputImage >::UnsetLabelForUndecidedPixels(), itk::MultiLabelSTAPLEImageFilter< TInputImage, TOutputImage, TWeights >::UnsetLabelForUndecidedPixels(), itk::MultiLabelSTAPLEImageFilter< TInputImage, TOutputImage, TWeights >::UnsetMaximumNumberOfIterations(), and itk::MultiLabelSTAPLEImageFilter< TInputImage, TOutputImage, TWeights >::UnsetPriorProbabilities().

template<class TNeuron = itk::VariableLengthVector<double>, class TDistance = itk::Statistics::EuclideanDistanceMetric<TNeuron>, unsigned int VMapDimension = 2>
static Pointer otb::SOMMap< TNeuron, TDistance, VMapDimension >::New ( )
static

Creation through object factory macro

template<class TNeuron = itk::VariableLengthVector<double>, class TDistance = itk::Statistics::EuclideanDistanceMetric<TNeuron>, unsigned int VMapDimension = 2>
void otb::SOMMap< TNeuron, TDistance, VMapDimension >::operator= ( const Self )
private
PixelType itk::VectorImage< TNeuron::ComponentType , VImageDimension >::operator[] ( const IndexType index)
inlineinherited

Access a pixel. This result cannot be used as an lvalue because the pixel is converted on the fly to a VariableLengthVector.

To use the results to modify this image, return value optimization must be relied upon.

For efficiency, this function does not check that the image has actually been allocated yet.

Definition at line 267 of file itkVectorImage.h.

const PixelType itk::VectorImage< TNeuron::ComponentType , VImageDimension >::operator[] ( const IndexType index) const
inlineinherited

Access a pixel.

For efficiency, this function does not check that the image has actually been allocated yet.

Definition at line 273 of file itkVectorImage.h.

virtual void itk::DataObject::PrepareForNewData ( )
inlinevirtualinherited

Setup a DataObject to receive new data. This method is called by the pipeline mechanism on each output of filter that needs to execute. The default implementation is to return a DataObject to its initial state. This may involve releasing previously allocated bulk data. Subclasses of DataObject may want to override this method and/or the Initialize() method if they want a different default behavior (for instance a DataObject might want finer control over its bulk data memory management).

Definition at line 416 of file itkDataObject.h.

void itk::LightObject::Print ( std::ostream &  os,
Indent  indent = 0 
) const
inherited

Cause the object to print itself out.

Avoid DLL boundary problems. This function will be common to all itk objects. It just calls the header/self/trailer virtual print methods, which can be overriden by subclasses (any itk object).

Definition at line 137 of file itkLightObject.cxx.

References itk::Indent::GetNextIndent().

Referenced by itk::operator<<(), and itk::VideoStream< TFrameType >::PrintSelf().

void itk::LightObject::PrintHeader ( std::ostream &  os,
Indent  indent 
) const
protectedvirtualinherited

Define a default print header for all objects.

Definition at line 315 of file itkLightObject.cxx.

bool itk::Object::PrintObservers ( std::ostream &  os,
Indent  indent 
) const
protectedinherited

Definition at line 483 of file itkObject.cxx.

template<class TNeuron , class TDistance , unsigned int VMapDimension>
void otb::SOMMap< TNeuron, TDistance, VMapDimension >::PrintSelf ( std::ostream &  os,
itk::Indent  indent 
) const
protectedvirtual

PrintSelf method

Reimplemented from itk::ImageBase< VImageDimension >.

Definition at line 84 of file otbSOMMap.txx.

void itk::LightObject::PrintTrailer ( std::ostream &  os,
Indent  indent 
) const
protectedvirtualinherited

Define a default print trailer for all objects.

Definition at line 325 of file itkLightObject.cxx.

void itk::DataObject::PropagateRequestedRegion ( void  )
virtualinherited

Methods to update the pipeline. Called internally by the pipeline mechanism.

Reimplemented in itk::ImageAdaptor< TImage, TAccessor >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, otb::Accessor::VectorImageToASPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ShiftScalePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexConjugatePixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >, and otb::ImageList< TImage >.

Definition at line 393 of file itkDataObject.cxx.

References itk::Math::e, itk::DataObjectError::SetDataObject(), itk::ExceptionObject::SetDescription(), and itk::ExceptionObject::SetLocation().

void itk::DataObject::PropagateResetPipeline ( )
protectedvirtualinherited

Propagate a call to ResetPipeline(). Called only from ProcessObject.

Definition at line 382 of file itkDataObject.cxx.

void itk::Object::Register ( ) const
virtualinherited

Increase the reference count (mark as used by another object).

Reimplemented from itk::LightObject.

Definition at line 323 of file itkObject.cxx.

Referenced by itk::ObjectFactoryBase::RegisterFactory(), and itk::ObjectFactoryBase::RegisterFactoryInternal().

void itk::DataObject::ReleaseData ( )
inherited

Release data back to system to conserve memory resource. Used during pipeline execution. Releasing this data does not make down-stream data invalid, so it does not modify the MTime of this data object.

Definition at line 203 of file itkDataObject.cxx.

virtual void itk::DataObject::ReleaseDataFlagOff ( )
virtualinherited
virtual void itk::DataObject::ReleaseDataFlagOn ( )
virtualinherited
void itk::Object::RemoveAllObservers ( )
inherited

Remove all observers .

Definition at line 442 of file itkObject.cxx.

void itk::Object::RemoveObserver ( unsigned long  tag)
inherited

Remove the observer with this tag value.

Definition at line 432 of file itkObject.cxx.

Referenced by otb::StreamingImageVirtualWriter< TInputImage >::GenerateData(), and otb::ImageFileWriter< TInputImage >::Update().

template<unsigned int VImageDimension>
bool itk::ImageBase< VImageDimension >::RequestedRegionIsOutsideOfTheBufferedRegion ( )
virtualinherited

Determine whether the RequestedRegion is outside of the BufferedRegion. This method returns true if the RequestedRegion is outside the BufferedRegion (true if at least one pixel is outside). This is used by the pipeline mechanism to determine whether a filter needs to re-execute in order to satisfy the current request. If the current RequestedRegion is already inside the BufferedRegion from the previous execution (and the current filter is up to date), then a given filter does not need to re-execute

Reimplemented from itk::DataObject.

Definition at line 373 of file itkImageBase.hxx.

References itk::Index< VIndexDimension >::GetIndex(), and itk::Size< VDimension >::GetSize().

void itk::DataObject::ResetPipeline ( )
virtualinherited

Reset the pipeline. If an exception is thrown during an Update(), the pipeline may be in an inconsistent state. This method clears the internal state of the pipeline so Update() can be called.

Definition at line 375 of file itkDataObject.cxx.

template<unsigned int VImageDimension>
void itk::ImageBase< VImageDimension >::SetBufferedRegion ( const RegionType region)
virtualinherited

Set the region object that defines the size and starting index of the region of the image currently loaded in memory.

See Also
ImageRegion, SetLargestPossibleRegion(), SetRequestedRegion()

Reimplemented in itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, otb::Accessor::VectorImageToASPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ShiftScalePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexConjugatePixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >.

Definition at line 432 of file itkImageBase.hxx.

Referenced by itk::GPUInPlaceImageFilter< TInputImage, TOutputImage, TParentImageFilter >::AllocateOutputs(), itk::ImageSource< TOutputImage >::AllocateOutputs(), itk::FastMarchingExtensionImageFilter< TLevelSet, TAuxValue, VAuxDimension, TSpeedImage >::Initialize(), itk::FastMarchingExtensionImageFilterBase< TInput, TOutput, TAuxValue, VAuxDimension >::InitializeOutput(), itk::InPlaceImageFilter< TInputImage, TOutputImage >::InternalAllocateOutputs(), and itk::ImageBase< TImage::ImageDimension >::SetRegions().

void itk::Object::SetDebug ( bool  debugFlag) const
inherited

Set the value of the debug flag. A non-zero value turns debugging on.

Definition at line 273 of file itkObject.cxx.

template<unsigned int VImageDimension>
void itk::ImageBase< VImageDimension >::SetDirection ( const DirectionType direction)
virtualinherited

Set the direction cosines of the image. The direction cosines are vectors that point from one pixel to the next.

Each column of the matrix indicates the direction cosines of the unit vector that is parallel to the lines of the image grid corresponding to that dimension. For example, an image with Direction matrix

0.866 0.500 -0.500 0.866

has an image grid were the fastest changing index (dimension[0]) walks over a line that in physical space is oriented parallel to the vector (0.866, -0.5). The second fastest changing index (dimension[1]) walks along a line that in Physical space is oriented parallel to the vector (0.5, 0.866)

The columns of the Direction matrix are expected to form an orthogonal right handed coordinate syste. But this is not checked nor enforced in itk::ImageBase.

For details, please see:

http://www.itk.org/Wiki/Proposals:Orientation#Some_notes_on_the_DICOM_convention_and_current_ITK_usage

See Also
GetDirection()

Reimplemented in itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, otb::Accessor::VectorImageToASPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ShiftScalePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexConjugatePixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >.

Definition at line 149 of file itkImageBase.hxx.

void itk::DataObject::SetGlobalReleaseDataFlag ( bool  val)
staticinherited

Turn on/off a flag to control whether every object releases its data after being used by a filter. Being a global flag, it controls the behavior of all DataObjects and ProcessObjects.

Definition at line 183 of file itkDataObject.cxx.

void itk::Object::SetGlobalWarningDisplay ( bool  val)
staticinherited

This is a global flag that controls whether any debug, warning or error messages are displayed.

Set the value of the global debug output control flag.

Definition at line 381 of file itkObject.cxx.

template<unsigned int VImageDimension>
void itk::ImageBase< VImageDimension >::SetLargestPossibleRegion ( const RegionType region)
virtualinherited

Set the region object that defines the size and starting index for the largest possible region this image could represent. This is used in determining how much memory would be needed to load an entire dataset. It is also used to determine boundary true conditions.

See Also
ImageRegion, SetBufferedRegion(), SetRequestedRegion()

Reimplemented in itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, otb::Accessor::VectorImageToASPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ShiftScalePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexConjugatePixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >.

Definition at line 489 of file itkImageBase.hxx.

Referenced by otb::ImageSimulationMethod< TInputVectorData, TSpatialisation, TSimulationStep1, TSimulationStep2, TFTM, TOutputImage >::GenerateOutputInformation(), and itk::ImageBase< TImage::ImageDimension >::SetRegions().

void itk::Object::SetMetaDataDictionary ( const MetaDataDictionary rhs)
inherited
virtual void itk::VectorImage< TNeuron::ComponentType , VImageDimension >::SetNumberOfComponentsPerPixel ( unsigned int  n)
virtualinherited

Reimplemented from itk::ImageBase< VImageDimension >.

virtual void itk::Object::SetObjectName ( std::string  _arg)
virtualinherited

A facility to help application programmers set a human identifiable name for a given object. This has no inherent use in ITK, but is a convenience to allow developers to provide a name for this object.

template<unsigned int VImageDimension = 2>
virtual void itk::ImageBase< VImageDimension >::SetOrigin ( PointType  _arg)
virtualinherited

Set the origin of the image. The origin is the geometric coordinates of the image origin (pixel [0,0]). It is stored internally as SpacePrecisionType but may be set from float or double.

See Also
GetOrigin()

Reimplemented in itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, otb::Accessor::VectorImageToASPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ShiftScalePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexConjugatePixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >, itk::SpecialCoordinatesImage< TPixel, VImageDimension >, and itk::SpecialCoordinatesImage< TPixel, 3 >.

Referenced by otb::ImageSimulationMethod< TInputVectorData, TSpatialisation, TSimulationStep1, TSimulationStep2, TFTM, TOutputImage >::GenerateOutputInformation().

template<unsigned int VImageDimension>
void itk::ImageBase< VImageDimension >::SetOrigin ( const double  origin[VImageDimension])
virtualinherited
template<unsigned int VImageDimension>
void itk::ImageBase< VImageDimension >::SetOrigin ( const float  origin[VImageDimension])
virtualinherited
void itk::DataObject::SetPipelineMTime ( ModifiedTimeType  time)
inlineinherited

The maximum MTime of all upstream filters and data objects. This does not include the MTime of this data object.

Definition at line 393 of file itkDataObject.h.

Referenced by itk::ProcessObject::UpdateOutputInformation().

void itk::VectorImage< TNeuron::ComponentType , VImageDimension >::SetPixel ( const IndexType index,
const PixelType value 
)
inlineinherited

Set a pixel value.

Allocate() needs to have been called first – for efficiency, this function does not check that the image has actually been allocated yet.

Definition at line 216 of file itkVectorImage.h.

void itk::VectorImage< TNeuron::ComponentType , VImageDimension >::SetPixelContainer ( PixelContainer container)
inherited

Set the container to use. Note that this does not cause the DataObject to be modified.

virtual void itk::DataObject::SetRealTimeStamp ( RealTimeStamp  _arg)
virtualinherited

RealTime stamp for the last time this DataObject was generated. By default, the real time stamp is initialized to the origin of the Unix epoch. That is the time 00:00:00 UTC on 1 January 1970 (or 1970-01-01T00:00:00Z ISO 8601)

void itk::Object::SetReferenceCount ( int  ref)
virtualinherited

Sets the reference count (use with care)

If there is a delete method, invoke it.

Reimplemented from itk::LightObject.

Definition at line 359 of file itkObject.cxx.

template<unsigned int VImageDimension = 2>
virtual void itk::ImageBase< VImageDimension >::SetRegions ( const RegionType region)
inlinevirtualinherited

Convenience methods to set the LargestPossibleRegion, BufferedRegion and RequestedRegion. Allocate must still be called.

Definition at line 294 of file itkImageBase.h.

template<unsigned int VImageDimension = 2>
virtual void itk::ImageBase< VImageDimension >::SetRegions ( const SizeType size)
inlinevirtualinherited

Definition at line 301 of file itkImageBase.h.

void itk::DataObject::SetReleaseDataFlag ( bool  flag)
inlineinherited

Turn on/off a flag to control whether this object's data is released after being used by a filter.

Definition at line 323 of file itkDataObject.h.

template<unsigned int VImageDimension>
void itk::ImageBase< VImageDimension >::SetRequestedRegion ( const RegionType region)
virtualinherited

Set the region object that defines the size and starting index for the region of the image requested (i.e., the region of the image to be operated on by a filter). Setting the RequestedRegion does not cause the object to be modified. This method is called internally by the pipeline and therefore bypasses the modified time calculation.

See Also
ImageRegion, SetLargestPossibleRegion(), SetBufferedRegion()

Reimplemented in itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, otb::Accessor::VectorImageToASPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ShiftScalePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexConjugatePixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >.

Definition at line 462 of file itkImageBase.hxx.

Referenced by otb::PersistentStreamingStatisticsMapFromLabelImageFilter< TInputVectorImage, TLabelImage >::GenerateInputRequestedRegion(), itk::watershed::EquivalenceRelabeler< TScalar, TImageDimension >::GenerateInputRequestedRegion(), itk::ImageTransformer< TInputImage >::GenerateInputRequestedRegion(), itk::watershed::EquivalenceRelabeler< TScalar, TImageDimension >::GenerateOutputRequestedRegion(), itk::watershed::Relabeler< TScalar, TImageDimension >::GenerateOutputRequestedRegion(), itk::watershed::Segmenter< TInputImage >::GenerateOutputRequestedRegion(), and itk::ImageBase< TImage::ImageDimension >::SetRegions().

template<unsigned int VImageDimension>
void itk::ImageBase< VImageDimension >::SetRequestedRegion ( const DataObject data)
virtualinherited

Set the requested region from this data object to match the requested region of the data object passed in as a parameter. This method implements the API from DataObject. The data object parameter must be castable to an ImageBase. Setting the RequestedRegion does not cause the object to be modified. This method is called internally by the pipeline and therefore bypasses the modified time calculation.

Reimplemented from itk::DataObject.

Reimplemented in itk::ImageAdaptor< TImage, TAccessor >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, otb::Accessor::VectorImageToASPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ShiftScalePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexConjugatePixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >.

Definition at line 474 of file itkImageBase.hxx.

References itk::ImageBase< VImageDimension >::GetRequestedRegion().

template<unsigned int VImageDimension>
void itk::ImageBase< VImageDimension >::SetRequestedRegionToLargestPossibleRegion ( )
virtualinherited

Set the RequestedRegion to the LargestPossibleRegion. This forces a filter to produce all of the output in one execution (i.e. not streaming) on the next call to Update().

Reimplemented from itk::DataObject.

Reimplemented in itk::ImageAdaptor< TImage, TAccessor >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, otb::Accessor::VectorImageToASPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ShiftScalePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexConjugatePixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >.

Definition at line 288 of file itkImageBase.hxx.

template<unsigned int VImageDimension>
void itk::ImageBase< VImageDimension >::SetSpacing ( const SpacingType spacing)
virtualinherited

Set the spacing (size of a pixel) of the image. The spacing is the geometric distance between image samples along each dimension. It is stored internally as double, but may be set from float. These methods also pre-compute the Index to Physical point transforms of the image.

See Also
GetSpacing()

Reimplemented in itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, otb::Accessor::VectorImageToASPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ShiftScalePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexConjugatePixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >, itk::SpecialCoordinatesImage< TPixel, VImageDimension >, and itk::SpecialCoordinatesImage< TPixel, 3 >.

Definition at line 93 of file itkImageBase.hxx.

Referenced by itk::ImageBase< TImage::ImageDimension >::InternalSetSpacing().

template<unsigned int VImageDimension>
void itk::ImageBase< VImageDimension >::SetSpacing ( const double  spacing[VImageDimension])
virtualinherited
template<unsigned int VImageDimension>
void itk::ImageBase< VImageDimension >::SetSpacing ( const float  spacing[VImageDimension])
virtualinherited
void itk::Object::SetTimeStamp ( const TimeStamp timeStamp)
protectedvirtualinherited

Set the time stamp of this object. This method must be used very carefully !!!. Most mortals will never need to call this method.

Set the time stamp of this object. To be used very carefully !!!. Most mortals will never need to call this method.

Definition at line 302 of file itkObject.cxx.

virtual void itk::VectorImage< TNeuron::ComponentType , VImageDimension >::SetVectorLength ( VectorLengthType  _arg)
virtualinherited

Set/Get macros for the length of each vector in the vector image

bool itk::DataObject::ShouldIReleaseData ( ) const
inherited

Return flag indicating whether data should be released after use by a filter.

Definition at line 212 of file itkDataObject.cxx.

template<unsigned int VImageDimension = 2>
template<typename TCoordRep , typename TIndexRep >
void itk::ImageBase< VImageDimension >::TransformContinuousIndexToPhysicalPoint ( const ContinuousIndex< TIndexRep, VImageDimension > &  index,
Point< TCoordRep, VImageDimension > &  point 
) const
inlineinherited

Get a physical point (in the space which the origin and spacing information comes from) from a continuous index (in the index space)

See Also
Transform

Definition at line 472 of file itkImageBase.h.

template<unsigned int VImageDimension = 2>
template<typename TCoordRep >
void itk::ImageBase< VImageDimension >::TransformIndexToPhysicalPoint ( const IndexType index,
Point< TCoordRep, VImageDimension > &  point 
) const
inlineinherited

Get a physical point (in the space which the origin and spacing information comes from) from a discrete index (in the index space)

See Also
Transform

Definition at line 493 of file itkImageBase.h.

template<unsigned int VImageDimension = 2>
template<typename TCoordRep >
void itk::ImageBase< VImageDimension >::TransformLocalVectorToPhysicalVector ( const FixedArray< TCoordRep, VImageDimension > &  inputGradient,
FixedArray< TCoordRep, VImageDimension > &  outputGradient 
) const
inlineinherited

Take a vector or covariant vector that has been computed in the coordinate system parallel to the image grid and rotate it by the direction cosines in order to get it in terms of the coordinate system of the image acquisition device. This implementation in the Image multiply the array (vector or covariant vector) by the matrix of Direction Cosines. The arguments of the method are of type FixedArray to make possible to use this method with both Vector and CovariantVector. The Method is implemented differently in the itk::Image.

See Also
Image

Definition at line 530 of file itkImageBase.h.

template<unsigned int VImageDimension = 2>
template<typename TCoordRep , typename TIndexRep >
bool itk::ImageBase< VImageDimension >::TransformPhysicalPointToContinuousIndex ( const Point< TCoordRep, VImageDimension > &  point,
ContinuousIndex< TIndexRep, VImageDimension > &  index 
) const
inlineinherited

Get the continuous index from a physical point.

Returns true if the resulting index is within the image, false otherwise.

See Also
Transform

Definition at line 445 of file itkImageBase.h.

template<unsigned int VImageDimension = 2>
template<typename TCoordRep >
bool itk::ImageBase< VImageDimension >::TransformPhysicalPointToIndex ( const Point< TCoordRep, VImageDimension > &  point,
IndexType index 
) const
inlineinherited

Get the index (discrete) of a voxel from a physical point. Floating point index results are rounded to integers Returns true if the resulting index is within the image, false otherwise

See Also
Transform

Definition at line 407 of file itkImageBase.h.

template<unsigned int VImageDimension = 2>
template<typename TCoordRep >
void itk::ImageBase< VImageDimension >::TransformPhysicalVectorToLocalVector ( const FixedArray< TCoordRep, VImageDimension > &  inputGradient,
FixedArray< TCoordRep, VImageDimension > &  outputGradient 
) const
inlineinherited

Take a vector or covariant vector that has been computed in terms of the coordinate system of the image acquisition device, and rotate it by the inverse direction cosines in order to get it in the coordinate system parallel to the image grid. This implementation in the Image multiply the array (vector or covariant vector) by the inverse of Direction Cosines. The arguments of the method are of type FixedArray to make possible to use this method with both Vector and CovariantVector.

Definition at line 561 of file itkImageBase.h.

void itk::Object::UnRegister ( ) const
virtualinherited

Decrease the reference count (release by another object).

If there is a delete method, invoke it.

Reimplemented from itk::LightObject.

Definition at line 337 of file itkObject.cxx.

Referenced by itk::ObjectFactoryBase::DeleteNonInternalFactory(), and itk::Object::New().

void itk::DataObject::Update ( void  )
virtualinherited

Provides opportunity for the data object to insure internal consistency before access. Also causes owning source/filter (if any) to update itself. The Update() method is composed of UpdateOutputInformation(), PropagateRequestedRegion(), and UpdateOutputData(). This method may call methods that throw an InvalidRequestedRegionError exception. This exception will leave the pipeline in an inconsistent state. You will need to call ResetPipeline() on the last ProcessObject in your pipeline in order to restore the pipeline to a state where you can call Update() again.

Reimplemented in itk::SpatialObject< VDimension >, itk::SpatialObject< 3 >, itk::SpatialObject< TDimension >, itk::SpatialObject< TMesh::PointDimension >, itk::ImageAdaptor< TImage, TAccessor >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, otb::Accessor::VectorImageToASPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ShiftScalePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexConjugatePixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >.

Definition at line 355 of file itkDataObject.cxx.

Referenced by itk::HistogramToImageFilter< THistogram, TImage, TFunction >::GenerateOutputInformation().

template<unsigned int VImageDimension>
void itk::ImageBase< VImageDimension >::UpdateOutputData ( void  )
virtualinherited

UpdateOutputData() is part of the pipeline infrastructure to communicate between ProcessObjects and DataObjects. The method of the superclass is overriden to check if the requested image region has zero pixels. This is needed so that filters can set an input's requested region to zero, to indicate that it does not need to be updated or executed.

Reimplemented from itk::DataObject.

Reimplemented in itk::ImageAdaptor< TImage, TAccessor >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, otb::Accessor::VectorImageToASPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ShiftScalePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexConjugatePixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >.

Definition at line 264 of file itkImageBase.hxx.

template<unsigned int VImageDimension>
void itk::ImageBase< VImageDimension >::UpdateOutputInformation ( void  )
virtualinherited

Update the information for this DataObject so that it can be used as an output of a ProcessObject. This method is used the pipeline mechanism to propagate information and initialize the meta data associated with a DataObject. This method calls its source's ProcessObject::UpdateOutputInformation() which determines modified times, LargestPossibleRegions, and any extra meta data like spacing, origin, etc.

Reimplemented from itk::DataObject.

Reimplemented in itk::ImageAdaptor< TImage, TAccessor >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, otb::Accessor::VectorImageToASPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ShiftScalePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexConjugatePixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >.

Definition at line 230 of file itkImageBase.hxx.

Referenced by otb::Wrapper::InputImageListParameter::AddImage().

template<unsigned int VImageDimension>
bool itk::ImageBase< VImageDimension >::VerifyRequestedRegion ( )
virtualinherited

Verify that the RequestedRegion is within the LargestPossibleRegion. If the RequestedRegion is not within the LargestPossibleRegion, then the filter cannot possible satisfy the request. This method returns true if the request can be satisfied and returns fails if the request cannot. This method is used by PropagateRequestedRegion(). PropagateRequestedRegion() throws a InvalidRequestedRegionError exception is the requested region is not within the LargestPossibleRegion.

Reimplemented from itk::DataObject.

Reimplemented in itk::ImageAdaptor< TImage, TAccessor >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, otb::Accessor::VectorImageToASPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ShiftScalePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexConjugatePixelAccessor< TImage::PixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, and itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >.

Definition at line 399 of file itkImageBase.hxx.

References itk::Index< VIndexDimension >::GetIndex(), and itk::Size< VDimension >::GetSize().

Member Data Documentation

const unsigned int otb::VectorImage< TNeuron::ComponentType , VImageDimension >::ImageDimension
staticinherited

Dimension of the image. This constant is used by functions that are templated over image type (as opposed to being templated over pixel type and dimension) when they need compile time access to the dimension of the image.

Definition at line 83 of file otbVectorImage.h.

template<unsigned int VImageDimension = 2>
DirectionType itk::ImageBase< VImageDimension >::m_Direction
protectedinherited

Definition at line 695 of file itkImageBase.h.

template<unsigned int VImageDimension = 2>
DirectionType itk::ImageBase< VImageDimension >::m_IndexToPhysicalPoint
protectedinherited

Matrices intended to help with the conversion of Index coordinates to PhysicalPoint coordinates

Definition at line 700 of file itkImageBase.h.

Referenced by itk::ImageBase< TImage::ImageDimension >::TransformContinuousIndexToPhysicalPoint(), and itk::ImageBase< TImage::ImageDimension >::TransformIndexToPhysicalPoint().

template<unsigned int VImageDimension = 2>
DirectionType itk::ImageBase< VImageDimension >::m_InverseDirection
protectedinherited

Definition at line 696 of file itkImageBase.h.

template<unsigned int VImageDimension = 2>
PointType itk::ImageBase< VImageDimension >::m_Origin
protectedinherited
template<unsigned int VImageDimension = 2>
DirectionType itk::ImageBase< VImageDimension >::m_PhysicalPointToIndex
protectedinherited
InternalReferenceCountType itk::LightObject::m_ReferenceCount
mutableprotectedinherited

Number of uses of this object by other objects.

Definition at line 156 of file itkLightObject.h.

SimpleFastMutexLock itk::LightObject::m_ReferenceCountLock
mutableprotectedinherited

Mutex lock to protect modification to the reference count

Definition at line 159 of file itkLightObject.h.

template<unsigned int VImageDimension = 2>
SpacingType itk::ImageBase< VImageDimension >::m_Spacing
protectedinherited

Origin, spacing, and direction in physical coordinates. This variables are protected for efficiency. They are referenced frequently by inner loop calculations.

Definition at line 693 of file itkImageBase.h.


The documentation for this class was generated from the following files:

Generated at Sat Apr 19 2014 19:03:32 for Orfeo Toolbox with doxygen 1.8.3.1