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Orfeo Toolbox
3.16
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Computes similarity between two objects to be registered. More...
#include <itkMatchCardinalityImageToImageMetric.h>
Inheritance diagram for itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >:
Collaboration diagram for itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >:Classes | |
| struct | ThreadStruct |
Static Public Member Functions | |
| static void | BreakOnError () |
| static bool | GetGlobalWarningDisplay () |
| static void | GlobalWarningDisplayOff () |
| static void | GlobalWarningDisplayOn () |
| static Pointer | New () |
| static Pointer | New () |
| static void | SetGlobalWarningDisplay (bool flag) |
Static Public Attributes | |
| static const unsigned int | FixedImageDimension = TFixedImage::ImageDimension |
| static const unsigned int | MovingImageDimension = TMovingImage::ImageDimension |
Protected Member Functions | |
| MatchCardinalityImageToImageMetric () | |
| MatchCardinalityImageToImageMetric () | |
| virtual | ~MatchCardinalityImageToImageMetric () |
| virtual | ~MatchCardinalityImageToImageMetric () |
| virtual void | ComputeImageDerivatives (const MovingImagePointType &mappedPoint, ImageDerivativesType &gradient, unsigned int threadID) const |
| MeasureType | GetNonconstValue (const TransformParametersType ¶meters) |
| MeasureType | GetNonconstValue (const TransformParametersType ¶meters) |
| void | GetValueAndDerivativeMultiThreadedInitiate (void) const |
| void | GetValueAndDerivativeMultiThreadedPostProcessInitiate (void) const |
| void | GetValueAndDerivativeMultiThreadedPreProcessInitiate (void) const |
| virtual void | GetValueAndDerivativeThread (unsigned int threadID) const |
| virtual void | GetValueAndDerivativeThreadPostProcess (unsigned int, bool) const |
| virtual void | GetValueAndDerivativeThreadPreProcess (unsigned int, bool) const |
| virtual bool | GetValueAndDerivativeThreadProcessSample (unsigned int, unsigned long, const MovingImagePointType &, double, const ImageDerivativesType &) const |
| void | GetValueMultiThreadedInitiate (void) const |
| void | GetValueMultiThreadedPostProcessInitiate (void) const |
| void | GetValueMultiThreadedPreProcessInitiate (void) const |
| virtual void | GetValueThread (unsigned int threadID) const |
| virtual void | GetValueThreadPostProcess (unsigned int, bool) const |
| virtual void | GetValueThreadPreProcess (unsigned int, bool) const |
| virtual bool | GetValueThreadProcessSample (unsigned int, unsigned long, const MovingImagePointType &, double) const |
| virtual void | PreComputeTransformValues (void) |
| virtual void | PrintHeader (std::ostream &os, Indent indent) const |
| bool | PrintObservers (std::ostream &os, Indent indent) const |
| void | PrintSelf (std::ostream &os, Indent indent) const |
| void | PrintSelf (std::ostream &os, Indent indent) const |
| virtual void | PrintTrailer (std::ostream &os, Indent indent) const |
| virtual void | SampleFixedImageIndexes (FixedImageSampleContainer &samples) const |
| virtual void | SampleFixedImageRegion (FixedImageSampleContainer &samples) const |
| virtual void | SampleFullFixedImageRegion (FixedImageSampleContainer &samples) const |
| virtual int | SplitFixedRegion (int i, int num, FixedImageRegionType &splitRegion) |
| virtual int | SplitFixedRegion (int i, int num, FixedImageRegionType &splitRegion) |
| virtual void | SynchronizeTransforms () const |
| virtual void | ThreadedGetValue (const FixedImageRegionType &outputRegionForThread, int threadId) |
| virtual void | ThreadedGetValue (const FixedImageRegionType &outputRegionForThread, int threadId) |
| virtual void | TransformPoint (unsigned int sampleNumber, MovingImagePointType &mappedPoint, bool &sampleWithinSupportRegion, double &movingImageValue, unsigned int threadID) const |
| virtual void | TransformPointWithDerivatives (unsigned int sampleNumber, MovingImagePointType &mappedPoint, bool &sampleWithinSupportRegion, double &movingImageValue, ImageDerivativesType &gradient, unsigned int threadID) const |
Static Protected Member Functions | |
| static ITK_THREAD_RETURN_TYPE | GetValueAndDerivativeMultiThreaded (void *arg) |
| static ITK_THREAD_RETURN_TYPE | GetValueAndDerivativeMultiThreadedPostProcess (void *arg) |
| static ITK_THREAD_RETURN_TYPE | GetValueAndDerivativeMultiThreadedPreProcess (void *arg) |
| static ITK_THREAD_RETURN_TYPE | GetValueMultiThreaded (void *arg) |
| static ITK_THREAD_RETURN_TYPE | GetValueMultiThreadedPostProcess (void *arg) |
| static ITK_THREAD_RETURN_TYPE | GetValueMultiThreadedPreProcess (void *arg) |
| static ITK_THREAD_RETURN_TYPE | ThreaderCallback (void *arg) |
| static ITK_THREAD_RETURN_TYPE | ThreaderCallback (void *arg) |
Static Protected Attributes | |
| static const unsigned int | DeformationSplineOrder = 3 |
Private Member Functions | |
| MatchCardinalityImageToImageMetric (const Self &) | |
| MatchCardinalityImageToImageMetric (const Self &) | |
| void | operator= (const Self &) |
| void | operator= (const Self &) |
Private Attributes | |
| bool | m_MeasureMatches |
| int | m_NumberOfThreads |
| std::vector< unsigned long > | m_ThreadCounts |
| MultiThreader::Pointer | m_Threader |
| std::vector< MeasureType > | m_ThreadMatches |
Computes similarity between two objects to be registered.
This Class is templated over the type of the fixed and moving images to be compared.
This metric computes cardinality of the set of pixels that match exactly between the moving and fixed images. The spatial correspondance between both images is established through a Transform. Pixel values are taken from the Moving image. Their positions are mapped to the Fixed image and result in general in non-grid position on it. Values at these non-grid position of the Fixed image are interpolated using a user-selected Interpolator.
This metric is designed for matching label maps. All pixel mismatches are considered equal whether they are between label 1 and label 2 or between label 1 and label 500. In other words, the magnitude of an individual label mismatch is not relevant, or the occurence of a label mismatch is important.
Given the nature of label maps, a nearest neighbor interpolator is the preferred interpolator.
The metric measure can measure the number of pixel matches (pixels with exactly the same label) or pixel mismatches (pixels with different labels). The returned metric value is the number of pixel matches (or mismatches) normalized by the number of pixels considered. The number of pixel considered is a function of the number of pixels in the overlap of the fixed and moving image buffers conditional on any assigned masks.
Definition at line 71 of file itkMatchCardinalityImageToImageMetric.h.
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Definition at line 445 of file itkOptImageToImageMetric.h.
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If a BSplineInterpolationFunction is used, this class obtain image derivatives from the BSpline interpolator. Otherwise, image derivatives are computed using central differencing.
Definition at line 456 of file itkOptImageToImageMetric.h.
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Definition at line 448 of file itkOptImageToImageMetric.h.
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Definition at line 440 of file itkOptImageToImageMetric.h.
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Definition at line 442 of file itkOptImageToImageMetric.h.
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Definition at line 433 of file itkOptImageToImageMetric.h.
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Definition at line 437 of file itkOptImageToImageMetric.h.
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Definition at line 435 of file itkOptImageToImageMetric.h.
| typedef SmartPointer<const Self> itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::ConstPointer |
Definition at line 76 of file itkOptMatchCardinalityImageToImageMetric.h.
| typedef SmartPointer<const Self> itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::ConstPointer |
Definition at line 80 of file itkMatchCardinalityImageToImageMetric.h.
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Type used for representing point components
Definition at line 69 of file itkOptImageToImageMetric.h.
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Type used for representing point components
Definition at line 70 of file itkImageToImageMetric.h.
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Typedefs for using central difference calculator.
Definition at line 460 of file itkOptImageToImageMetric.h.
| typedef Superclass::DerivativeType itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::DerivativeType |
Definition at line 94 of file itkOptMatchCardinalityImageToImageMetric.h.
| typedef Superclass::DerivativeType itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::DerivativeType |
Definition at line 100 of file itkMatchCardinalityImageToImageMetric.h.
| typedef Superclass::FixedImageConstPointer itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::FixedImageConstPointer |
Definition at line 97 of file itkOptMatchCardinalityImageToImageMetric.h.
| typedef Superclass::FixedImageConstPointer itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::FixedImageConstPointer |
Definition at line 103 of file itkMatchCardinalityImageToImageMetric.h.
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Definition at line 112 of file itkOptImageToImageMetric.h.
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Index and Point typedef support.
Definition at line 106 of file itkOptImageToImageMetric.h.
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Definition at line 107 of file itkOptImageToImageMetric.h.
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Definition at line 135 of file itkImageToImageMetric.h.
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Definition at line 143 of file itkOptImageToImageMetric.h.
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Definition at line 134 of file itkImageToImageMetric.h.
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Definition at line 142 of file itkOptImageToImageMetric.h.
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Type for the mask of the fixed image. Only pixels that are "inside" this mask will be considered for the computation of the metric
Definition at line 133 of file itkImageToImageMetric.h.
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Type for the mask of the fixed image. Only pixels that are "inside" this mask will be considered for the computation of the metric
Definition at line 141 of file itkOptImageToImageMetric.h.
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Definition at line 81 of file itkOptImageToImageMetric.h.
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Definition at line 109 of file itkOptImageToImageMetric.h.
| typedef Superclass::FixedImageRegionType itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::FixedImageRegionType |
Definition at line 99 of file itkOptMatchCardinalityImageToImageMetric.h.
| typedef Superclass::FixedImageRegionType itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::FixedImageRegionType |
Definition at line 105 of file itkMatchCardinalityImageToImageMetric.h.
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FixedImageSamplePoint typedef support.
Definition at line 366 of file itkOptImageToImageMetric.h.
| typedef Superclass::FixedImageType itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::FixedImageType |
Definition at line 95 of file itkOptMatchCardinalityImageToImageMetric.h.
| typedef Superclass::FixedImageType itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::FixedImageType |
Definition at line 101 of file itkMatchCardinalityImageToImageMetric.h.
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Definition at line 124 of file itkImageToImageMetric.h.
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Definition at line 132 of file itkOptImageToImageMetric.h.
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Definition at line 123 of file itkImageToImageMetric.h.
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Definition at line 131 of file itkOptImageToImageMetric.h.
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Definition at line 120 of file itkImageToImageMetric.h.
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Definition at line 128 of file itkOptImageToImageMetric.h.
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Definition at line 119 of file itkImageToImageMetric.h.
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Definition at line 127 of file itkOptImageToImageMetric.h.
| typedef Superclass::GradientPixelType itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::GradientPixelType |
Definition at line 91 of file itkOptMatchCardinalityImageToImageMetric.h.
| typedef Superclass::GradientPixelType itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::GradientPixelType |
Definition at line 95 of file itkMatchCardinalityImageToImageMetric.h.
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Definition at line 463 of file itkOptImageToImageMetric.h.
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Definition at line 441 of file itkOptImageToImageMetric.h.
| typedef Superclass::InputPointType itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::InputPointType |
Definition at line 96 of file itkMatchCardinalityImageToImageMetric.h.
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Define the type of the reference count according to the target. This allows the use of atomic operations
Definition at line 137 of file itkLightObject.h.
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Definition at line 127 of file itkImageToImageMetric.h.
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Definition at line 135 of file itkOptImageToImageMetric.h.
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Type of the Interpolator Base class
Definition at line 108 of file itkImageToImageMetric.h.
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Type of the Interpolator Base class
Definition at line 117 of file itkOptImageToImageMetric.h.
| typedef Superclass::MeasureType itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::MeasureType |
Definition at line 93 of file itkOptMatchCardinalityImageToImageMetric.h.
| typedef Superclass::MeasureType itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::MeasureType |
Definition at line 99 of file itkMatchCardinalityImageToImageMetric.h.
| typedef Superclass::MovingImageConstPointer itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::MovingImageConstPointer |
Definition at line 98 of file itkOptMatchCardinalityImageToImageMetric.h.
| typedef Superclass::MovingImageConstPointer itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::MovingImageConstPointer |
Definition at line 104 of file itkMatchCardinalityImageToImageMetric.h.
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Definition at line 108 of file itkOptImageToImageMetric.h.
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Definition at line 143 of file itkImageToImageMetric.h.
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Definition at line 150 of file itkOptImageToImageMetric.h.
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Definition at line 142 of file itkImageToImageMetric.h.
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Definition at line 149 of file itkOptImageToImageMetric.h.
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Type for the mask of the moving image. Only pixels that are "inside" this mask will be considered for the computation of the metric
Definition at line 141 of file itkImageToImageMetric.h.
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Type for the mask of the moving image. Only pixels that are "inside" this mask will be considered for the computation of the metric
Definition at line 148 of file itkOptImageToImageMetric.h.
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Definition at line 76 of file itkOptImageToImageMetric.h.
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Definition at line 77 of file itkImageToImageMetric.h.
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Definition at line 444 of file itkOptImageToImageMetric.h.
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Definition at line 110 of file itkOptImageToImageMetric.h.
| typedef Superclass::MovingImageType itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::MovingImageType |
Definition at line 96 of file itkOptMatchCardinalityImageToImageMetric.h.
| typedef Superclass::MovingImageType itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::MovingImageType |
Definition at line 102 of file itkMatchCardinalityImageToImageMetric.h.
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Definition at line 321 of file itkOptImageToImageMetric.h.
| typedef Superclass::OutputPointType itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::OutputPointType |
Definition at line 97 of file itkMatchCardinalityImageToImageMetric.h.
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Type of the parameters.
Definition at line 153 of file itkImageToImageMetric.h.
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Type of the parameters.
Definition at line 160 of file itkOptImageToImageMetric.h.
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ParametersType typedef. It defines a position in the optimization search space.
Definition at line 46 of file itkCostFunction.h.
| typedef SmartPointer<Self> itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::Pointer |
Definition at line 75 of file itkOptMatchCardinalityImageToImageMetric.h.
| typedef SmartPointer<Self> itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::Pointer |
Definition at line 79 of file itkMatchCardinalityImageToImageMetric.h.
| typedef Superclass::RealType itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::RealType |
Types transferred from the base class
Definition at line 82 of file itkOptMatchCardinalityImageToImageMetric.h.
| typedef Superclass::RealType itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::RealType |
Types transferred from the base class
Definition at line 86 of file itkMatchCardinalityImageToImageMetric.h.
| typedef MatchCardinalityImageToImageMetric itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::Self |
Standard class typedefs.
Definition at line 73 of file itkOptMatchCardinalityImageToImageMetric.h.
| typedef MatchCardinalityImageToImageMetric itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::Self |
Standard class typedefs.
Definition at line 77 of file itkMatchCardinalityImageToImageMetric.h.
| typedef ImageToImageMetric<TFixedImage, TMovingImage > itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::Superclass |
Definition at line 74 of file itkOptMatchCardinalityImageToImageMetric.h.
| typedef ImageToImageMetric<TFixedImage, TMovingImage > itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::Superclass |
Definition at line 78 of file itkMatchCardinalityImageToImageMetric.h.
| typedef Superclass::TransformJacobianType itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::TransformJacobianType |
Definition at line 90 of file itkOptMatchCardinalityImageToImageMetric.h.
| typedef Superclass::TransformJacobianType itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::TransformJacobianType |
Definition at line 94 of file itkMatchCardinalityImageToImageMetric.h.
| typedef Superclass::TransformParametersType itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::TransformParametersType |
Definition at line 89 of file itkOptMatchCardinalityImageToImageMetric.h.
| typedef Superclass::TransformParametersType itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::TransformParametersType |
Definition at line 93 of file itkMatchCardinalityImageToImageMetric.h.
| typedef Superclass::TransformPointer itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::TransformPointer |
Definition at line 88 of file itkOptMatchCardinalityImageToImageMetric.h.
| typedef Superclass::TransformPointer itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::TransformPointer |
Definition at line 92 of file itkMatchCardinalityImageToImageMetric.h.
| typedef Superclass::TransformType itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::TransformType |
Definition at line 87 of file itkOptMatchCardinalityImageToImageMetric.h.
| typedef Superclass::TransformType itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::TransformType |
Definition at line 91 of file itkMatchCardinalityImageToImageMetric.h.
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Definition at line 436 of file itkOptImageToImageMetric.h.
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Constructor
Definition at line 41 of file itkMatchCardinalityImageToImageMetric.txx.
References itk::MultiThreader::New().
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Definition at line 144 of file itkMatchCardinalityImageToImageMetric.h.
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Definition at line 134 of file itkOptMatchCardinalityImageToImageMetric.h.
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Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects
Definition at line 389 of file itkObject.cxx.
References itk::SubjectImplementation::AddObserver().
Referenced by otb::StreamingImageVirtualWriter< TInputImage >::GenerateData(), itk::ProgressAccumulator::RegisterInternalFilter(), otb::ImageFileWriter< TInputImage >::Update(), and otb::WriterWatcherBase::WriterWatcherBase().
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Definition at line 401 of file itkObject.cxx.
References itk::SubjectImplementation::AddObserver().
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This method is called when itkExceptionMacro executes. It allows the debugger to break on error.
Definition at line 149 of file itkLightObject.cxx.
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Computes the gradient image and assigns it to m_GradientImage
Compute the gradient image and assign it to m_GradientImage.
Reimplemented in itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >.
Definition at line 152 of file itkImageToImageMetric.txx.
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Computes the gradient image and assigns it to m_GradientImage
Reimplemented in itk::KappaStatisticImageToImageMetric< TFixedImage, TMovingImage >.
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Compute image derivatives at a point.
Compute image derivatives using a central difference function if we are not using a BSplineInterpolator, which includes derivatives.
Definition at line 1158 of file itkOptImageToImageMetric.txx.
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Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.
Reimplemented from itk::Object.
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Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.
Reimplemented from itk::Object.
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Turn debugging output off.
Definition at line 253 of file itkObject.cxx.
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Turn debugging output on.
Definition at line 242 of file itkObject.cxx.
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Delete an itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C delete method will not work with reference counting.
Delete a itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C++ delete method will not work with reference counting.
Definition at line 88 of file itkLightObject.cxx.
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Get the command associated with the given tag. NOTE: This returns a pointer to a Command, but it is safe to asign this to a Command::Pointer. Since Command inherits from LightObject, at this point in the code, only a pointer or a reference to the Command can be used.
Definition at line 414 of file itkObject.cxx.
References itk::Object::GetCommand(), and NULL.
Referenced by itk::Object::GetCommand().
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Get the value of the debug flag.
Definition at line 264 of file itkObject.cxx.
Referenced by otb::ogr::ImageReference< double >::GetDebug().
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Get the derivatives of the match measure.
Implements itk::SingleValuedCostFunction.
Definition at line 103 of file itkOptMatchCardinalityImageToImageMetric.h.
References itk::Array< TValueType >::Fill().
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Get the derivatives of the match measure.
Implements itk::SingleValuedCostFunction.
Definition at line 109 of file itkMatchCardinalityImageToImageMetric.h.
References itk::Array< TValueType >::Fill().
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Get the Fixed Image.
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Get the Fixed Image.
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Get the region over which the metric will be computed
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Get the region over which the metric will be computed
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Get the value of the global debug output control flag.
Definition at line 381 of file itkObject.cxx.
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Get Gradient Image.
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Get Gradient Image.
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Get a pointer to the Interpolator.
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Get a pointer to the Interpolator.
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Definition at line 532 of file itkObject.cxx.
References NULL.
Referenced by otb::RenderingImageFilter< TInputImage, TOutputImage >::BeforeThreadedGenerateData(), itk::Brains2MaskImageIO::CanReadFile(), otb::DataNode< TPrecision, VDimension, TValuePrecision >::CopyFieldList(), otb::VectorImage< TPixel, VImageDimension >::CopyInformation(), otb::Image< TPixel, VImageDimension >::CopyInformation(), itk::GDCMImageIO::GetBodyPart(), itk::GDCMImageIO::GetInstitution(), itk::GDCMImageIO::GetManufacturer(), itk::GDCMImageIO::GetModality(), itk::GDCMImageIO::GetModel(), itk::GDCMImageIO::GetNumberOfSeriesInStudy(), itk::GDCMImageIO::GetNumberOfStudyRelatedSeries(), itk::GDCMImageIO::GetPatientAge(), itk::GDCMImageIO::GetPatientDOB(), itk::GDCMImageIO::GetPatientID(), itk::GDCMImageIO::GetPatientName(), itk::GDCMImageIO::GetPatientSex(), itk::GDCMImageIO::GetScanOptions(), itk::GDCMImageIO::GetStudyDate(), itk::GDCMImageIO::GetStudyDescription(), itk::GDCMImageIO::GetStudyID(), itk::GDCMImageIO::GetValueFromTag(), otb::GDALImageIO::InternalReadImageInformation(), itk::GDCMImageIO::InternalReadImageInformation(), otb::GDALImageIO::InternalWriteImageInformation(), otb::RAMDrivenAdaptativeStreamingManager< TImage >::PrepareStreaming(), itk::DICOMImageIO2::Read(), itk::DICOMImageIO2::ReadImageInformation(), itk::NrrdImageIO::ReadImageInformation(), otb::JPEG2000ImageIO::ReadImageInformation(), itk::MetaImageIO::ReadImageInformation(), itk::VoxBoCUBImageIO::ReadImageInformation(), itk::MRCImageIO::ReadImageInformation(), itk::IPLCommonImageIO::ReadImageInformation(), itk::PhilipsRECImageIO::ReadImageInformation(), itk::AnalyzeImageIO::ReadImageInformation(), itk::Bruker2DSEQImageIO::ReadImageInformation(), otb::ImageMetadataInterfaceBase::SetImage(), itk::NiftiImageIO::SetImageIOMetadataFromNIfTI(), otb::VectorDataToLabelImageFilter< TVectorData, TOutputImage >::SetOutputParametersFromImage(), itk::NrrdImageIO::Write(), itk::GDCMImageIO::Write(), and itk::PolygonGroupSpatialObjectXMLFileWriter::WriteFile().
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Definition at line 543 of file itkObject.cxx.
References NULL.
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Get the Moving Image.
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Get the Moving Image.
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Return this objects modified time.
Return the modification for this object.
Reimplemented in itk::ImageAdaptor< TImage, TAccessor >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, otb::Accessor::VectorImageToASPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ShiftScalePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::SpatialObject< TDimension >, itk::SpatialObject< 3 >, itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >, itk::MultiResolutionImageRegistrationMethod< TFixedImage, TMovingImage >, itk::ImageRegistrationMethod< TFixedImage, TMovingImage >, itk::VectorResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >, itk::ImageToSpatialObjectRegistrationMethod< TFixedImage, TMovingSpatialObject >, itk::TransformToDeformationFieldSource< TOutputImage, TTransformPrecisionType >, otb::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >, itk::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >, itk::PointSetToImageRegistrationMethod< TFixedPointSet, TMovingImage >, itk::BoundingBox< TPointIdentifier, VPointDimension, TCoordRep, TPointsContainer >, itk::PointSetToPointSetRegistrationMethod< TFixedPointSet, TMovingPointSet >, itk::DeformationFieldSource< TOutputImage >, itk::ImageSpatialObject< TDimension, TPixelType >, itk::ImageSpatialObject< TDimension, unsigned char >, itk::MeshSpatialObject< TMesh >, and itk::SceneSpatialObject< TSpaceDimension >.
Definition at line 286 of file itkObject.cxx.
Referenced by itk::DeformationFieldSource< TOutputImage >::GetMTime(), itk::BoundingBox< TPointIdentifier, VPointDimension, TCoordRep, TPointsContainer >::GetMTime(), itk::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >::GetMTime(), otb::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >::GetMTime(), itk::TransformToDeformationFieldSource< TOutputImage, TTransformPrecisionType >::GetMTime(), itk::VectorResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >::GetMTime(), itk::SpatialObject< TDimension >::GetMTime(), itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >::GetMTime(), itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >::GetObjectMTime(), otb::Function::NoStretchRenderingFunction< TPixel, TRGBPixel, TPixelRepresentationFunction, TTransferFunction >::Initialize(), otb::Function::StandardRenderingFunction< TPixel, TRGBPixel, TPixelRepresentationFunction, TTransferFunction >::Initialize(), itk::VTKImageExportBase::PipelineModifiedCallback(), and itk::ProcessObject::UpdateOutputInformation().
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inline |
Return the multithreader used by this class.
Definition at line 129 of file itkOptMatchCardinalityImageToImageMetric.h.
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inline |
Return the multithreader used by this class.
Definition at line 139 of file itkMatchCardinalityImageToImageMetric.h.
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virtual |
Run-time type information (and related methods).
Reimplemented from itk::ImageToImageMetric< TFixedImage, TMovingImage >.
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virtual |
Run-time type information (and related methods).
Reimplemented from itk::ImageToImageMetric< TFixedImage, TMovingImage >.
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protected |
Non-const version of GetValue(). This is a hack around various const issues with trying to spawn threads from the const version of GetValue().
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protected |
Non-const version of GetValue(). This is a hack around various const issues with trying to spawn threads from the const version of GetValue().
Get the match Measure (non const version. spawns threads).
Definition at line 69 of file itkMatchCardinalityImageToImageMetric.txx.
References itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::ThreadStruct::Metric.
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virtualinherited |
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inlineinherited |
Get the number of pixels considered in the computation.
Definition at line 187 of file itkOptImageToImageMetric.h.
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inlinevirtualinherited |
Return the number of parameters required by the Transform
Implements itk::CostFunction.
Reimplemented in itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >.
Definition at line 223 of file itkImageToImageMetric.h.
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inlinevirtualinherited |
Return the number of parameters required by the Transform
Implements itk::CostFunction.
Definition at line 234 of file itkOptImageToImageMetric.h.
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Get the number of pixels considered in the computation.
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inlineinherited |
Definition at line 257 of file itkOptImageToImageMetric.h.
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Reimplemented from itk::ImageToImageMetric< TFixedImage, TMovingImage >.
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Gets the reference count on this object.
Definition at line 105 of file itkLightObject.h.
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Get the Threader.
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inlineinherited |
Definition at line 326 of file itkOptImageToImageMetric.h.
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virtualinherited |
Get a pointer to the Transform.
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virtualinherited |
Get a pointer to the Transform.
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virtualinherited |
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virtualinherited |
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virtualinherited |
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virtualinherited |
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virtual |
Get the value of the metric at a particular parameter setting. The metric value is the number of pixel matches (or mis-matches, see SetMeasureMatches()) normalized by the number of pixels under consideration (within the buffer and if specified within a mask). In other words, the metric measure the percentage of pixel matches or mismatches.
Implements itk::SingleValuedCostFunction.
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virtual |
Get the value of the metric at a particular parameter setting. The metric value is the number of pixel matches (or mis-matches, see SetMeasureMatches()) normalized by the number of pixels under consideration (within the buffer and if specified within a mask). In other words, the metric measure the percentage of pixel matches or mismatches.
Implements itk::SingleValuedCostFunction.
Definition at line 58 of file itkMatchCardinalityImageToImageMetric.txx.
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This method returns the value and derivative of the cost function corresponding to the specified parameters
Reimplemented in itk::ImageToSpatialObjectMetric< TFixedImage, TMovingSpatialObject >.
Definition at line 71 of file itkSingleValuedCostFunction.h.
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staticprotectedinherited |
Get the match Measure
Definition at line 1420 of file itkOptImageToImageMetric.txx.
References itk::ImageToImageMetric< TFixedImage, TMovingImage >::GetValueAndDerivativeThread(), ITK_THREAD_RETURN_VALUE, and itk::ImageToImageMetric< TFixedImage, TMovingImage >::MultiThreaderParameterType::metric.
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Definition at line 1369 of file itkOptImageToImageMetric.txx.
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Get the match Measure
Definition at line 1441 of file itkOptImageToImageMetric.txx.
References itk::ImageToImageMetric< TFixedImage, TMovingImage >::GetValueAndDerivativeThreadPostProcess(), ITK_THREAD_RETURN_VALUE, and itk::ImageToImageMetric< TFixedImage, TMovingImage >::MultiThreaderParameterType::metric.
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Definition at line 1386 of file itkOptImageToImageMetric.txx.
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Get the match Measure
Definition at line 1399 of file itkOptImageToImageMetric.txx.
References itk::ImageToImageMetric< TFixedImage, TMovingImage >::GetValueAndDerivativeThreadPreProcess(), ITK_THREAD_RETURN_VALUE, and itk::ImageToImageMetric< TFixedImage, TMovingImage >::MultiThreaderParameterType::metric.
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Definition at line 1357 of file itkOptImageToImageMetric.txx.
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Definition at line 1459 of file itkOptImageToImageMetric.txx.
Referenced by itk::ImageToImageMetric< TFixedImage, TMovingImage >::GetValueAndDerivativeMultiThreaded().
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inlineprotectedvirtualinherited |
Reimplemented in itk::MattesMutualInformationImageToImageMetric< TFixedImage, TMovingImage >.
Definition at line 571 of file itkOptImageToImageMetric.h.
Referenced by itk::ImageToImageMetric< TFixedImage, TMovingImage >::GetValueAndDerivativeMultiThreadedPostProcess().
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inlineprotectedvirtualinherited |
Reimplemented in itk::MattesMutualInformationImageToImageMetric< TFixedImage, TMovingImage >.
Definition at line 560 of file itkOptImageToImageMetric.h.
Referenced by itk::ImageToImageMetric< TFixedImage, TMovingImage >::GetValueAndDerivativeMultiThreadedPreProcess().
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inlineprotectedvirtualinherited |
Reimplemented in itk::MattesMutualInformationImageToImageMetric< TFixedImage, TMovingImage >, and itk::MeanSquaresImageToImageMetric< TFixedImage, TMovingImage >.
Definition at line 564 of file itkOptImageToImageMetric.h.
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staticprotectedinherited |
Get the match Measure
Definition at line 1257 of file itkOptImageToImageMetric.txx.
References itk::ImageToImageMetric< TFixedImage, TMovingImage >::GetValueThread(), ITK_THREAD_RETURN_VALUE, and itk::ImageToImageMetric< TFixedImage, TMovingImage >::MultiThreaderParameterType::metric.
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protectedinherited |
Definition at line 1204 of file itkOptImageToImageMetric.txx.
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staticprotectedinherited |
Get the match Measure
Definition at line 1277 of file itkOptImageToImageMetric.txx.
References itk::ImageToImageMetric< TFixedImage, TMovingImage >::GetValueThreadPostProcess(), ITK_THREAD_RETURN_VALUE, and itk::ImageToImageMetric< TFixedImage, TMovingImage >::MultiThreaderParameterType::metric.
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protectedinherited |
Definition at line 1222 of file itkOptImageToImageMetric.txx.
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staticprotectedinherited |
Get the match Measure
Definition at line 1235 of file itkOptImageToImageMetric.txx.
References itk::ImageToImageMetric< TFixedImage, TMovingImage >::GetValueThreadPreProcess(), ITK_THREAD_RETURN_VALUE, and itk::ImageToImageMetric< TFixedImage, TMovingImage >::MultiThreaderParameterType::metric.
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protectedinherited |
Definition at line 1192 of file itkOptImageToImageMetric.txx.
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inlineprotectedvirtualinherited |
Definition at line 1296 of file itkOptImageToImageMetric.txx.
Referenced by itk::ImageToImageMetric< TFixedImage, TMovingImage >::GetValueMultiThreaded().
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inlineprotectedvirtualinherited |
Reimplemented in itk::MattesMutualInformationImageToImageMetric< TFixedImage, TMovingImage >.
Definition at line 547 of file itkOptImageToImageMetric.h.
Referenced by itk::ImageToImageMetric< TFixedImage, TMovingImage >::GetValueMultiThreadedPostProcess().
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inlineprotectedvirtualinherited |
Reimplemented in itk::MattesMutualInformationImageToImageMetric< TFixedImage, TMovingImage >.
Definition at line 537 of file itkOptImageToImageMetric.h.
Referenced by itk::ImageToImageMetric< TFixedImage, TMovingImage >::GetValueMultiThreadedPreProcess().
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inlineprotectedvirtualinherited |
Reimplemented in itk::MattesMutualInformationImageToImageMetric< TFixedImage, TMovingImage >, and itk::MeanSquaresImageToImageMetric< TFixedImage, TMovingImage >.
Definition at line 541 of file itkOptImageToImageMetric.h.
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inlinestaticinherited |
Definition at line 100 of file itkObject.h.
References itk::Object::SetGlobalWarningDisplay().
Referenced by itk::OutputWindow::DisplayText(), itk::Win32OutputWindow::PromptText(), and itk::Win32OutputWindow::WndProc().
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Definition at line 98 of file itkObject.h.
References itk::Object::SetGlobalWarningDisplay().
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Return true if an observer is registered for this event.
Definition at line 467 of file itkObject.cxx.
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Initialize the Metric by making sure that all the components are present and plugged together correctly
Initialize
Reimplemented in itk::MattesMutualInformationImageToImageMetric< TFixedImage, TMovingImage >, itk::MattesMutualInformationImageToImageMetric< TFixedImage, TMovingImage >, itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >, itk::GradientDifferenceImageToImageMetric< TFixedImage, TMovingImage >, itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >, itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >, and itk::MeanSquaresImageToImageMetric< TFixedImage, TMovingImage >.
Definition at line 86 of file itkImageToImageMetric.txx.
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virtualinherited |
Initialize the Metric by making sure that all the components are present and plugged together correctly
Reimplemented in itk::MattesMutualInformationImageToImageMetric< TFixedImage, TMovingImage >, itk::MattesMutualInformationImageToImageMetric< TFixedImage, TMovingImage >, itk::CompareHistogramImageToImageMetric< TFixedImage, TMovingImage >, itk::GradientDifferenceImageToImageMetric< TFixedImage, TMovingImage >, itk::KullbackLeiblerCompareHistogramImageToImageMetric< TFixedImage, TMovingImage >, itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >, and itk::MeanSquaresImageToImageMetric< TFixedImage, TMovingImage >.
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inherited |
Call Execute on all the Commands observing this event id.
Definition at line 446 of file itkObject.cxx.
Referenced by otb::Wrapper::Application::AddProcess(), itk::ParallelSparseFieldLevelSetImageFilter< TInputImage, TOutputImage >::IterateThreaderCallback(), and itk::VTKImageExportBase::UpdateDataCallback().
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inherited |
Call Execute on all the Commands observing this event id. The actions triggered by this call doesn't modify this object.
Definition at line 457 of file itkObject.cxx.
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virtual |
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virtual |
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virtual |
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Update the modification time for this object. Many filters rely on the modification time to determine if they need to recompute their data.
Make sure this object's modified time is greater than all others.
Reimplemented in otb::SVMModel< TValue, TLabel >, otb::SurfaceAdjacencyEffect6SCorrectionSchemeFilter< TInputImage, TOutputImage >, itk::ImageAdaptor< TImage, TAccessor >, itk::ImageAdaptor< TImage, Accessor::AsinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SqrtPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, otb::Accessor::VectorImageToASPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::TanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::CosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::VectorToRGBPixelAccessor< TImage::PixelType::ValueType > >, itk::ImageAdaptor< TImage, Accessor::RGBToVectorPixelAccessor< TImage::PixelType::ComponentType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToModulusPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AbsPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ShiftScalePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::SinPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::LogPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToPhasePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< VectorImage< TPixelType, Dimension >, Accessor::VectorImageToImagePixelAccessor< TPixelType > >, itk::ImageAdaptor< TImage, Accessor::Log10PixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AtanPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToRealPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ComplexToImaginaryPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpNegativePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::ExpPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AcosPixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::RGBToLuminancePixelAccessor< TImage::PixelType, TOutputPixelType > >, itk::ImageAdaptor< TImage, Accessor::AddPixelAccessor< TImage::PixelType > >, otb::GenericRSTransform< TScalarType, NInputDimensions, NOutputDimensions >, otb::MeanShiftImageFilter< TInputImage, TOutputImage, TLabeledOutput, TBufferConverter >, otb::MeanShiftImageFilter< TInputImage, TOutputImage, TLabeledOutput, MeanShift::VectorBufferConverter >, otb::GCPsToRPCSensorModelImageFilter< TImage >, otb::Polygon< TValue >, otb::ImageRegionAdaptativeSplitter< VImageDimension >, otb::GenericInterpolateImageFunction< TInputImage, TFunction, TBoundaryCondition, TCoordRep >, itk::GrayscaleDilateImageFilter< TInputImage, TOutputImage, TKernel >, otb::PolyLineParametricPathWithValue< TValue, VDimension >, itk::GrayscaleErodeImageFilter< TInputImage, TOutputImage, TKernel >, otb::PolyLineParametricPathWithValue< TValue, 2 >, itk::MorphologicalGradientImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalClosingImageFilter< TInputImage, TOutputImage, TKernel >, itk::GrayscaleMorphologicalOpeningImageFilter< TInputImage, TOutputImage, TKernel >, otb::PhysicalToRPCSensorModelImageFilter< TImage >, itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, TFilter >, itk::MiniPipelineSeparableImageFilter< TInputImage, TOutputImage, RankImageFilter< TInputImage, TInputImage, FlatStructuringElement< ::itk::GetImageDimension< TInputImage >::ImageDimension > > >, itk::NormalizeImageFilter< TInputImage, TOutputImage >, and otb::StatisticsXMLFileReader< TMeasurementVector >.
Definition at line 297 of file itkObject.cxx.
Referenced by otb::Wrapper::InputImageListParameter::AddFromFileName(), otb::Wrapper::InputVectorDataListParameter::AddFromFileName(), otb::Wrapper::InputFilenameListParameter::AddFromFileName(), otb::Wrapper::InputImageListParameter::AddImage(), otb::Wrapper::InputVectorDataListParameter::AddNullElement(), otb::Wrapper::InputImageListParameter::AddNullElement(), otb::Wrapper::InputFilenameListParameter::AddNullElement(), otb::Wrapper::StringListParameter::AddNullElement(), otb::VectorDataModel::AddPointToGeometry(), otb::Wrapper::InputVectorDataListParameter::AddVectorData(), otb::Wrapper::InputFilenameListParameter::ClearValue(), otb::Wrapper::InputVectorDataListParameter::ClearValue(), otb::Wrapper::InputImageListParameter::ClearValue(), otb::VectorDataModel::DeleteGeometry(), otb::VectorDataModel::EndGeometry(), otb::Wrapper::InputFilenameListParameter::Erase(), otb::Wrapper::InputVectorDataListParameter::Erase(), otb::Wrapper::InputImageListParameter::Erase(), itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::InsertNarrowBandNode(), otb::ImageWidget< TInputImage >::LinearInterpolationOff(), otb::ImageWidget< TInputImage >::LinearInterpolationOn(), itk::MatrixOffsetTransformBase< TScalarType, NInputDimensions, NOutputDimensions >::MatrixOffsetTransformBase(), otb::ogr::ImageReference< double >::Modified(), otb::Function::StandardRenderingFunction< TPixel, TRGBPixel, TPixelRepresentationFunction, TTransferFunction >::SetAutoMinMax(), otb::BlendingImageFilter< TInputImage1, TInputImage2, TOutputImage >::SetBlendingFunction(), otb::ImageLayerGenerator< TImageLayer >::SetBlendingFunction(), otb::TileMapImageIO::SetCacheDirectory(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetCenter(), otb::Function::StandardRenderingFunction< TPixel, TRGBPixel, TPixelRepresentationFunction, TTransferFunction >::SetChannelList(), itk::LBFGSBOptimizer::SetCostFunction(), itk::MINC2ImageIO::SetDimensionName(), itk::ImageIOBase::SetDimensions(), otb::ImageIOBase::SetDimensions(), itk::ImageIOBase::SetDirection(), otb::ImageIOBase::SetDirection(), otb::Wrapper::InputImageListParameter::SetImageList(), itk::GDCMSeriesFileNames::SetInputDirectory(), otb::HistogramStatisticsFunction< TInputHistogram, TOutput >::SetInputHistogram(), otb::ImageToGenericRSOutputParameters< TImage >::SetInputKeywordList(), otb::Wrapper::InputImageListParameter::SetListFromFileName(), otb::Wrapper::InputVectorDataListParameter::SetListFromFileName(), otb::Wrapper::InputFilenameListParameter::SetListFromFileName(), otb::Function::RenderingFunction< TPixel, TRGBPixel >::SetListSample(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetMatrix(), itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBand(), itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandInnerRadius(), itk::NarrowBandImageFilterBase< TInputImage, Image< TOutputPixelType,::itk::GetImageDimension< TInputImage >::ImageDimension > >::SetNarrowBandTotalRadius(), otb::Wrapper::InputVectorDataListParameter::SetNthFileName(), otb::Wrapper::InputImageListParameter::SetNthFileName(), otb::Wrapper::InputFilenameListParameter::SetNthFileName(), otb::ImageIOBase::SetNumberOfDimensions(), itk::ImageIOBase::SetNumberOfDimensions(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetOffset(), itk::ImageIOBase::SetOrigin(), otb::ImageIOBase::SetOrigin(), otb::ImageToGenericRSOutputParameters< TImage >::SetOutputProjectionRef(), otb::MapProjectionAdapter::SetParameter(), otb::Function::GaussianRenderingFunction< TPixel, TRGBPixel, TPixelRepresentationFunction, TTransferFunction >::SetParameters(), otb::Function::StandardRenderingFunction< TPixel, TRGBPixel, TPixelRepresentationFunction, TTransferFunction >::SetParameters(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetRealThresholds(), otb::ImageLayerGenerator< TImageLayer >::SetRenderingFunction(), otb::RenderingImageFilter< TInputImage, TOutputImage >::SetRenderingFunction(), otb::ImageIOBase::SetSpacing(), itk::ImageIOBase::SetSpacing(), itk::ThresholdLabelerImageFilter< TInputImage, TOutputImage >::SetThresholds(), itk::Statistics::GoodnessOfFitFunctionBase< TInputHistogram >::SetTotalObservedScale(), itk::MatrixOffsetTransformBase< TScalarType, 3, 3 >::SetTranslation(), otb::Wrapper::InputFilenameParameter::SetValue(), otb::Wrapper::OutputFilenameParameter::SetValue(), otb::Wrapper::ListViewParameter::SetValue(), otb::Wrapper::ChoiceParameter::SetValue(), otb::Wrapper::InputVectorDataListParameter::SetVectorDataList(), and otb::MapProjectionAdapter::SetWkt().
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virtualinherited |
Initialize the components related to supporting multiple threads
MultiThreading Initialize
Set the fixed parameters first. Some transforms have parameters which depend on the values of the fixed parameters. For instance, the BSplineDeformableTransform checks the grid size (part of the fixed parameters) before setting the parameters.
Definition at line 364 of file itkOptImageToImageMetric.txx.
References itk::BSplineDeformableTransform< TScalarType, NDimensions, VSplineOrder >::GetNumberOfWeights(), itk::SmartPointer< TObjectType >::GetPointer(), NULL, itk::Transform< TScalarType, NInputDimensions, NOutputDimensions >::SetFixedParameters(), itk::BSplineInterpolateImageFunction< TImageType, TCoordRep, TCoefficientType >::SetNumberOfThreads(), itk::Transform< TScalarType, NInputDimensions, NOutputDimensions >::SetParameters(), and itk::Array< TValueType >::SetSize().
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Method for creation through the object factory.
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static |
Method for creation through the object factory.
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private |
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private |
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protectedvirtualinherited |
Cache pre-transformed points, weights and indices.
Reimplemented in itk::MattesMutualInformationImageToImageMetric< TFixedImage, TMovingImage >.
Definition at line 856 of file itkOptImageToImageMetric.txx.
References itk::Array< TValueType >::Fill().
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inherited |
Cause the object to print itself out.
Avoid DLL boundary problems. This function will be common to all itk objects. It just calls the header/self/trailer virtual print methods, which can be overriden by subclasses (any itk object).
Definition at line 135 of file itkLightObject.cxx.
References itk::Indent::GetNextIndent().
Referenced by itk::operator<<().
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protectedvirtualinherited |
Define a default print header for all objects.
Definition at line 320 of file itkLightObject.cxx.
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protectedinherited |
Definition at line 478 of file itkObject.cxx.
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protectedvirtual |
PrintSelf
Reimplemented from itk::ImageToImageMetric< TFixedImage, TMovingImage >.
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protectedvirtual |
PrintSelf
Reimplemented from itk::ImageToImageMetric< TFixedImage, TMovingImage >.
Definition at line 306 of file itkMatchCardinalityImageToImageMetric.txx.
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protectedvirtualinherited |
Define a default print trailer for all objects.
Definition at line 331 of file itkLightObject.cxx.
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virtualinherited |
Increase the reference count (mark as used by another object).
Reimplemented from itk::LightObject.
Definition at line 309 of file itkObject.cxx.
Referenced by itk::ObjectFactoryBase::RegisterFactory().
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inherited |
Reinitialize the seed of the random number generator that selects the sample of pixels used for estimating the image histograms and the joint histogram. By nature, this metric is not deterministic, since at each run it may select a different set of pixels. By initializing the random number generator seed to the same value you can restore determinism. On the other hand, calling the method ReinitializeSeed() without arguments will use the clock from your machine in order to have a very random initialization of the seed. This will indeed increase the non-deterministic behavior of the metric.
Definition at line 835 of file itkOptImageToImageMetric.txx.
References itk::Statistics::MersenneTwisterRandomVariateGenerator::GetInstance().
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inherited |
Definition at line 843 of file itkOptImageToImageMetric.txx.
References itk::Statistics::MersenneTwisterRandomVariateGenerator::GetInstance().
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Remove all observers .
Definition at line 435 of file itkObject.cxx.
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inherited |
Remove the observer with this tag value.
Definition at line 425 of file itkObject.cxx.
Referenced by otb::StreamingImageVirtualWriter< TInputImage >::GenerateData(), and otb::ImageFileWriter< TInputImage >::Update().
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protectedvirtualinherited |
Use the indexes that have been passed to the metric
Definition at line 553 of file itkOptImageToImageMetric.txx.
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protectedvirtualinherited |
Uniformly select a sample set from the fixed image domain.
Sample the fixed image using a random walk
Definition at line 587 of file itkOptImageToImageMetric.txx.
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protectedvirtualinherited |
Gather all the pixels from the fixed image domain.
Sample the fixed image domain using all pixels in the Fixed image region
Definition at line 703 of file itkOptImageToImageMetric.txx.
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virtualinherited |
Set/Get gradient computation.
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virtualinherited |
Set/Get gradient computation.
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inherited |
Set the value of the debug flag. A non-zero value turns debugging on.
Definition at line 275 of file itkObject.cxx.
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virtualinherited |
Connect the Fixed Image.
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virtualinherited |
Connect the Fixed Image.
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inherited |
Set the fixed image indexes to be used as the samples when computing the match metric
Definition at line 171 of file itkOptImageToImageMetric.txx.
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virtualinherited |
Set/Get the fixed image mask.
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inlinevirtualinherited |
Definition at line 203 of file itkImageToImageMetric.h.
References itk::ImageToImageMetric< TFixedImage, TMovingImage >::SetFixedImageMask().
Referenced by itk::ImageToImageMetric< TFixedImage, TMovingImage >::SetFixedImageMask().
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virtualinherited |
Set/Get the fixed image mask.
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virtualinherited |
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virtualinherited |
Set the region over which the metric will be computed
Definition at line 236 of file itkOptImageToImageMetric.txx.
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inherited |
Set the region over which the metric will be computed
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inherited |
Minimum fixed-image intensity needed for a sample to be used in the metric computation
Definition at line 204 of file itkOptImageToImageMetric.txx.
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staticinherited |
This is a global flag that controls whether any debug, warning or error messages are displayed.
Set the value of the global debug output control flag.
Definition at line 370 of file itkObject.cxx.
Referenced by itk::Object::GlobalWarningDisplayOff(), and itk::Object::GlobalWarningDisplayOn().
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virtualinherited |
Connect the Interpolator.
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virtualinherited |
Connect the Interpolator.
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virtual |
Set/Get whether this metric measures pixel matches or pixel mismatches. Note the GetValue() returns the number of matches (or mismatches) normalized by the number of pixels considered. In other words, the metric measures the percentage of pixel matches or mismatches. The default is to measure matches (MeasureMatchesOn).
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virtual |
Set/Get whether this metric measures pixel matches or pixel mismatches. Note the GetValue() returns the number of matches (or mismatches) normalized by the number of pixels considered. In other words, the metric measures the percentage of pixel matches or mismatches. The default is to measure matches (MeasureMatchesOn).
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inherited |
Definition at line 554 of file itkObject.cxx.
References NULL.
Referenced by otb::VectorImage< TPixel, VImageDimension >::CopyInformation(), and otb::Image< TPixel, VImageDimension >::CopyInformation().
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virtualinherited |
Connect the Moving Image.
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virtualinherited |
Connect the Moving Image.
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virtualinherited |
Set/Get the moving image mask.
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inlinevirtualinherited |
Definition at line 193 of file itkImageToImageMetric.h.
References itk::ImageToImageMetric< TFixedImage, TMovingImage >::SetMovingImageMask().
Referenced by itk::ImageToImageMetric< TFixedImage, TMovingImage >::SetMovingImageMask().
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virtualinherited |
Set/Get the moving image mask.
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virtualinherited |
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virtualinherited |
Number of spatial samples to used to compute metric This sets the number of samples.
Definition at line 155 of file itkOptImageToImageMetric.txx.
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inlineinherited |
Number of spatial samples to used to compute metric This sets the number of samples.
Definition at line 253 of file itkOptImageToImageMetric.h.
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virtual |
Get/Set the number of threads to create when executing.
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inherited |
Set/Get number of threads to use for computations.
Set the number of threads. This will be clamped by the multithreader, so we must check to see if it is accepted.
Definition at line 129 of file itkOptImageToImageMetric.txx.
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virtualinherited |
Sets the reference count (use with care)
If there is a delete method, invoke it.
Reimplemented from itk::LightObject.
Definition at line 347 of file itkObject.cxx.
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virtualinherited |
Connect the Transform.
Reimplemented in itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.
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virtualinherited |
Connect the Transform.
Reimplemented in itk::HistogramImageToImageMetric< TFixedImage, TMovingImage >.
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inherited |
Set the parameters defining the Transform.
Set the parameters that define a unique transform
Definition at line 70 of file itkImageToImageMetric.txx.
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inherited |
Set the parameters defining the Transform.
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inherited |
Select whether the metric will be computed using all the pixels on the fixed image region, or only using a set of randomly selected pixels. This value override IntensityThreshold, Masks, and SequentialSampling.
Definition at line 251 of file itkOptImageToImageMetric.txx.
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virtualinherited |
This boolean flag is only relevant when this metric is used along with a BSplineDeformableTransform. The flag enables/disables the caching of values computed when a physical point is mapped through the BSplineDeformableTransform. In particular it will cache the values of the BSpline weights for that points, and the indexes indicating what BSpline-grid nodes are relevant for that specific point. This caching is made optional due to the fact that the memory arrays used for the caching can reach large sizes even for moderate image size problems. For example, for a 3D image of 256^3, using 20% of pixels, these arrays will take about 1 Gigabyte of RAM for storage. The ratio of computing time between using the cache or not using the cache can reach 1:5, meaning that using the caching can provide a five times speed up. It is therefore, interesting to enable the caching, if enough memory is available for it. The caching is enabled by default, in order to preserve backward compatibility with previous versions of ITK.
Reimplemented in itk::MattesMutualInformationImageToImageMetric< TFixedImage, TMovingImage >.
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inherited |
Definition at line 185 of file itkOptImageToImageMetric.txx.
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inherited |
Definition at line 217 of file itkOptImageToImageMetric.txx.
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inherited |
If set to true, then every pixel in the fixed image will be scanned to determine if it should be used in registration metric computation. A pixel will be chosen if it meets any mask or threshold limits set. If set to false, then UseAllPixels will be set to false.
Definition at line 274 of file itkOptImageToImageMetric.txx.
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protectedvirtual |
Split the FixedImageRegion into "num" pieces, returning region "i" as "splitRegion". This method is called "num" times. The regions must not overlap. The method returns the number of pieces that the routine is capable of splitting the FixedImageRegion, i.e. return value is less than or equal to "num".
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protectedvirtual |
Split the FixedImageRegion into "num" pieces, returning region "i" as "splitRegion". This method is called "num" times. The regions must not overlap. The method returns the number of pieces that the routine is capable of splitting the FixedImageRegion, i.e. return value is less than or equal to "num".
Definition at line 211 of file itkMatchCardinalityImageToImageMetric.txx.
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protectedvirtualinherited |
Synchronizes the threader transforms with the transform member variable.
This method can be const because we are not altering the m_ThreaderTransform pointer. We are altering the object that m_ThreaderTransform[idx] points at. This is allowed under C++ const rules.
Set the fixed parameters first. Some transforms have parameters which depend on the values of the fixed parameters. For instance, the BSplineDeformableTransform checks the grid size (part of the fixed parameters) before setting the parameters.
Definition at line 1606 of file itkOptImageToImageMetric.txx.
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protectedvirtual |
Thread worker routine to calculate the contribution of the a subregion to the overall metric. Can only be called from GetValue().
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protectedvirtual |
Thread worker routine to calculate the contribution of the a subregion to the overall metric. Can only be called from GetValue().
Definition at line 143 of file itkMatchCardinalityImageToImageMetric.txx.
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staticprotected |
Static function used as a "callback" by the MultiThreader. The threading library will call this routine for each thread, which will delegate the control to ThreadedGetValue().
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staticprotected |
Static function used as a "callback" by the MultiThreader. The threading library will call this routine for each thread, which will delegate the control to ThreadedGetValue().
Definition at line 271 of file itkMatchCardinalityImageToImageMetric.txx.
References ITK_THREAD_RETURN_VALUE, and itk::MatchCardinalityImageToImageMetric< TFixedImage, TMovingImage >::ThreadStruct::Metric.
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protectedvirtualinherited |
Transform a point from FixedImage domain to MovingImage domain. This function also checks if mapped point is within support region.
Definition at line 917 of file itkOptImageToImageMetric.txx.
References itk::Transform< TScalarType, NInputDimensions, NOutputDimensions >::TransformPoint().
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protectedvirtualinherited |
Transform a point from FixedImage domain to MovingImage domain. This function also checks if mapped point is within support region.
Definition at line 1035 of file itkOptImageToImageMetric.txx.
References itk::Transform< TScalarType, NInputDimensions, NOutputDimensions >::TransformPoint().
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virtualinherited |
Decrease the reference count (release by another object).
If there is a delete method, invoke it.
Reimplemented from itk::LightObject.
Definition at line 324 of file itkObject.cxx.
Referenced by itk::Object::New(), and itk::ObjectFactoryBase::UnRegisterFactory().
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inlineinherited |
Definition at line 278 of file itkOptImageToImageMetric.h.
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inlineinherited |
Definition at line 274 of file itkOptImageToImageMetric.h.
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virtualinherited |
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virtualinherited |
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staticprotectedinherited |
Definition at line 429 of file itkOptImageToImageMetric.h.
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staticinherited |
Definition at line 91 of file itkImageToImageMetric.h.
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protectedinherited |
Pointer to BSplineInterpolator.
Definition at line 503 of file itkOptImageToImageMetric.h.
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protectedinherited |
Definition at line 473 of file itkOptImageToImageMetric.h.
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protectedinherited |
Definition at line 470 of file itkOptImageToImageMetric.h.
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protectedinherited |
Definition at line 466 of file itkOptImageToImageMetric.h.
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mutableprotectedinherited |
Definition at line 478 of file itkOptImageToImageMetric.h.
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protectedinherited |
Definition at line 469 of file itkOptImageToImageMetric.h.
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mutableprotectedinherited |
Definition at line 477 of file itkOptImageToImageMetric.h.
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protectedinherited |
Definition at line 468 of file itkOptImageToImageMetric.h.
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protectedinherited |
Definition at line 243 of file itkImageToImageMetric.h.
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protectedinherited |
Pointer to central difference calculator.
Definition at line 506 of file itkOptImageToImageMetric.h.
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protectedinherited |
Definition at line 237 of file itkImageToImageMetric.h.
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protectedinherited |
Definition at line 360 of file itkOptImageToImageMetric.h.
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mutableprotectedinherited |
Definition at line 250 of file itkImageToImageMetric.h.
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protectedinherited |
Definition at line 404 of file itkOptImageToImageMetric.h.
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protectedinherited |
Container to store a set of points and fixed image values.
Definition at line 379 of file itkOptImageToImageMetric.h.
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protectedinherited |
Definition at line 363 of file itkOptImageToImageMetric.h.
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protectedinherited |
Definition at line 244 of file itkImageToImageMetric.h.
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protectedinherited |
Definition at line 241 of file itkImageToImageMetric.h.
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protectedinherited |
Boolean to indicate if the interpolator BSpline.
Definition at line 501 of file itkOptImageToImageMetric.h.
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private |
Definition at line 185 of file itkMatchCardinalityImageToImageMetric.h.
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protectedinherited |
Definition at line 238 of file itkImageToImageMetric.h.
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mutableprotectedinherited |
Definition at line 251 of file itkImageToImageMetric.h.
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protectedinherited |
Definition at line 405 of file itkOptImageToImageMetric.h.
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protectedinherited |
Definition at line 384 of file itkOptImageToImageMetric.h.
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protectedinherited |
Definition at line 381 of file itkOptImageToImageMetric.h.
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mutableprotectedinherited |
Definition at line 235 of file itkImageToImageMetric.h.
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private |
Definition at line 192 of file itkMatchCardinalityImageToImageMetric.h.
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protectedinherited |
The number of BSpline transform weights is the number of of parameter in the support region (per dimension ).
Definition at line 427 of file itkOptImageToImageMetric.h.
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mutableprotectedinherited |
Definition at line 382 of file itkOptImageToImageMetric.h.
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protectedinherited |
Definition at line 414 of file itkOptImageToImageMetric.h.
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mutableprotectedinherited |
Number of uses of this object by other objects.
Definition at line 141 of file itkLightObject.h.
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mutableprotectedinherited |
Mutex lock to protect modification to the reference count
Definition at line 144 of file itkLightObject.h.
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protectedinherited |
Definition at line 412 of file itkOptImageToImageMetric.h.
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private |
Definition at line 187 of file itkMatchCardinalityImageToImageMetric.h.
|
private |
Support processing data in multiple threads. Used by subclasses (e.g., ImageSource).
Definition at line 191 of file itkMatchCardinalityImageToImageMetric.h.
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mutableprotectedinherited |
Definition at line 481 of file itkOptImageToImageMetric.h.
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mutableprotectedinherited |
Definition at line 480 of file itkOptImageToImageMetric.h.
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mutableprotectedinherited |
Definition at line 525 of file itkOptImageToImageMetric.h.
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protectedinherited |
Definition at line 524 of file itkOptImageToImageMetric.h.
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protectedinherited |
Copies of Transform helpers per thread (N-1 of them, since m_Transform will do the work for thread=0.
Definition at line 397 of file itkOptImageToImageMetric.h.
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private |
Definition at line 186 of file itkMatchCardinalityImageToImageMetric.h.
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mutableprotectedinherited |
Main transform to be used in thread = 0
Definition at line 240 of file itkImageToImageMetric.h.
|
protectedinherited |
Types and variables related to BSpline deformable transforms. If the transform is of type third order BSplineDeformableTransform, then we can speed up the metric derivative calculation by only inspecting the parameters within the support region of a mapped point. Boolean to indicate if the transform is BSpline deformable.
Definition at line 423 of file itkOptImageToImageMetric.h.
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protectedinherited |
Definition at line 409 of file itkOptImageToImageMetric.h.
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protectedinherited |
Definition at line 476 of file itkOptImageToImageMetric.h.
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protectedinherited |
Definition at line 359 of file itkOptImageToImageMetric.h.
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protectedinherited |
Definition at line 362 of file itkOptImageToImageMetric.h.
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protectedinherited |
Definition at line 410 of file itkOptImageToImageMetric.h.
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protectedinherited |
Definition at line 471 of file itkOptImageToImageMetric.h.
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protectedinherited |
Definition at line 527 of file itkOptImageToImageMetric.h.
|
protectedinherited |
Definition at line 526 of file itkOptImageToImageMetric.h.
|
staticinherited |
Constants for the image dimensions
Definition at line 88 of file itkImageToImageMetric.h.