#include <itkDeformableMesh3DFilter.h>

Inheritance diagram for itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >:

Collaboration diagram for itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >:

Public Types
typedef InputMeshType::CellTraits	CellTraits

typedef InputMeshType::CellType	CellType

typedef SmartPointer< const Self >	ConstPointer

typedef DataObject::Pointer	DataObjectPointer

typedef std::vector < DataObjectPointer >	DataObjectPointerArray

typedef DataObjectPointerArray::size_type	DataObjectPointerArraySizeType

typedef CovariantVector < double, 2 >	double2DVector

typedef CovariantVector < double, 3 >	double3DVector

typedef GradientImageType::Pointer	GradientImagePointer

typedef Image< GradientType, 3 >	GradientImageType

typedef ImageRegionIterator < GradientImageType >	GradientIterator

typedef CovariantVector < PixelType, 3 >	GradientType

typedef GradientImageType::IndexType	ImageIndexType

typedef GradientImageType::SizeType	ImageSizeType

typedef InputMeshType::CellDataContainer::ConstIterator	InputCellDataContainerConstIterator

typedef InputMeshType::CellDataContainerConstPointer	InputCellDataContainerConstPointer

typedef InputMeshType::CellDataContainer::Iterator	InputCellDataContainerIterator

typedef InputMeshType::CellDataContainerPointer	InputCellDataContainerPointer

typedef InputMeshType::CellsContainer::ConstIterator	InputCellsContainerConstIterator

typedef InputMeshType::CellsContainerConstPointer	InputCellsContainerConstPointer

typedef InputMeshType::CellsContainer::Iterator	InputCellsContainerIterator

typedef InputMeshType::CellsContainerPointer	InputCellsContainerPointer

typedef InputMeshType::ConstPointer	InputMeshConstPointer

typedef InputMeshType::Pointer	InputMeshPointer

typedef TInputMesh	InputMeshType

typedef InputMeshType::PointDataContainer::Iterator	InputPointDataContainerIterator

typedef InputMeshType::PointDataContainerPointer	InputPointDataContainerPointer

typedef InputMeshType::PointsContainer::ConstIterator	InputPointsContainerConstIterator

typedef InputMeshType::PointsContainerConstPointer	InputPointsContainerConstPointer

typedef InputMeshType::PointsContainer::Iterator	InputPointsContainerIterator

typedef InputMeshType::PointsContainerPointer	InputPointsContainerPointer

typedef InputMeshType::PointType	InputPointType

typedef CovariantVector< int, 3 >	int3DVector

typedef OutputMeshType::CellsContainer	OutputCellsContainer

typedef OutputMeshType::CellsContainerPointer	OutputCellsContainerPointer

typedef OutputMeshType::Pointer	OutputMeshPointer

typedef TOutputMesh	OutputMeshType

typedef OutputMeshType::PointsContainer::Iterator	OutputPointsContainerIterator

typedef OutputMeshType::PointsContainerPointer	OutputPointsContainerPointer

typedef InputMeshType::PixelType	PixelType

typedef SmartPointer< Self >	Pointer

typedef Image< unsigned char, 3 >	PotentialImageType

typedef ImageRegionIterator < PotentialImageType >	PotentialIterator

typedef DeformableMesh3DFilter	Self

typedef StiffnessMatrixType *	StiffnessMatrixRawPointer

typedef vnl_matrix_fixed < double, 4, 4 >	StiffnessMatrixType

typedef MeshToMeshFilter < TInputMesh, TOutputMesh >	Superclass

typedef itk::CellInterface < PixelType, CellTraits >	TCellInterface

typedef itk::TriangleCell < TCellInterface >	TriCell

Public Member Functions
virtual void	AbortGenerateDataOff ()

virtual void	AbortGenerateDataOn ()

unsigned long	AddObserver (const EventObject &event, Command *)

unsigned long	AddObserver (const EventObject &event, Command *) const

virtual ::itk::LightObject::Pointer	CreateAnother (void) const

virtual void	DebugOff () const

virtual void	DebugOn () const

virtual void	Delete ()

virtual void	EnlargeOutputRequestedRegion (DataObject *)

virtual const bool &	GetAbortGenerateData ()

Command *	GetCommand (unsigned long tag)

bool	GetDebug () const

virtual GradientImagePointer	GetGradient () const

const InputMeshType *	GetInput (void) const

const InputMeshType *	GetInput (unsigned int idx) const

DataObjectPointerArray &	GetInputs ()

MetaDataDictionary &	GetMetaDataDictionary (void)

const MetaDataDictionary &	GetMetaDataDictionary (void) const

virtual unsigned long	GetMTime () const

MultiThreader *	GetMultiThreader ()

virtual const char *	GetNameOfClass () const

virtual InputMeshPointer	GetNormals () const

DataObjectPointerArraySizeType	GetNumberOfInputs () const

DataObjectPointerArraySizeType	GetNumberOfOutputs () const

virtual const int &	GetNumberOfThreads ()

virtual DataObjectPointerArraySizeType	GetNumberOfValidRequiredInputs () const

OutputMeshType *	GetOutput (void)

OutputMeshType *	GetOutput (unsigned int idx)

DataObjectPointerArray &	GetOutputs ()

virtual const float &	GetProgress ()

virtual int	GetReferenceCount () const

virtual const bool &	GetReleaseDataBeforeUpdateFlag ()

virtual bool	GetReleaseDataFlag () const

virtual int	GetStepThreshold () const

virtual double2DVector	GetStiffness () const

virtual double	GetTimeStep () const

virtual void	GraftNthOutput (unsigned int idx, DataObject *output)

virtual void	GraftOutput (DataObject *output)

bool	HasObserver (const EventObject &event) const

void	InvokeEvent (const EventObject &)

void	InvokeEvent (const EventObject &) const

virtual DataObjectPointer	MakeOutput (unsigned int idx)

virtual void	Modified () const

virtual void	PrepareOutputs ()

void	Print (std::ostream &os, Indent indent=0) const

virtual void	PropagateRequestedRegion (DataObject *output)

virtual void	Register () const

virtual void	ReleaseDataBeforeUpdateFlagOff ()

virtual void	ReleaseDataBeforeUpdateFlagOn ()

void	ReleaseDataFlagOff ()

void	ReleaseDataFlagOn ()

void	RemoveAllObservers ()

void	RemoveObserver (unsigned long tag)

virtual void	ResetPipeline ()

virtual void	SetAbortGenerateData (bool _arg)

void	SetDebug (bool debugFlag) const

virtual void	SetGradient (GradientImagePointer _arg)

virtual void	SetGradientMagnitude (PixelType _arg)

void	SetInput (const InputMeshType *input)

void	SetMetaDataDictionary (const MetaDataDictionary &rhs)

virtual void	SetNumberOfThreads (int _arg)

virtual void	SetObjectLabel (unsigned char _arg)

void	SetOutput (TOutputMesh *output)

virtual void	SetPotentialMagnitude (PixelType _arg)

virtual void	SetPotentialOn (unsigned short _arg)

virtual void	SetProgress (float _arg)

virtual void	SetReferenceCount (int)

virtual void	SetReleaseDataBeforeUpdateFlag (bool _arg)

virtual void	SetReleaseDataFlag (bool flag)

virtual void	SetScale (double3DVector _arg)

virtual void	SetStepThreshold (int _arg)

virtual void	SetStiffness (double2DVector _arg)

void	SetStiffnessMatrix (StiffnessMatrixType *stiff, int i)

virtual void	SetTimeStep (double _arg)

virtual void	UnRegister () const

virtual void	Update ()

virtual void	UpdateLargestPossibleRegion ()

virtual void	UpdateOutputData (DataObject *output)

virtual void	UpdateOutputInformation ()

void	UpdateProgress (float amount)

Static Public Member Functions
static void	BreakOnError ()

static bool	GetGlobalWarningDisplay ()

static void	GlobalWarningDisplayOff ()

static void	GlobalWarningDisplayOn ()

static Pointer	New ()

static void	SetGlobalWarningDisplay (bool flag)

Protected Types
typedef int	InternalReferenceCountType

Protected Member Functions
	DeformableMesh3DFilter ()

	DeformableMesh3DFilter (const Self &)

	~DeformableMesh3DFilter ()

virtual void	AddInput (DataObject *input)

virtual void	AddOutput (DataObject *output)

virtual void	CacheInputReleaseDataFlags ()

void	CopyInputMeshToOutputMeshCellData ()

void	CopyInputMeshToOutputMeshCellLinks ()

void	CopyInputMeshToOutputMeshCells ()

void	CopyInputMeshToOutputMeshPointData ()

void	CopyInputMeshToOutputMeshPoints ()

virtual void	GenerateData ()

void	GenerateInputRequestedRegion ()

virtual void	GenerateOutputInformation ()

virtual void	GenerateOutputRequestedRegion (DataObject *output)

DataObject *	GetInput (unsigned int idx)

virtual const unsigned int &	GetNumberOfRequiredInputs ()

virtual const unsigned int &	GetNumberOfRequiredOutputs ()

const DataObject *	GetOutput (unsigned int idx) const

void	operator= (const Self &)

virtual void	PopBackInput ()

virtual void	PopFrontInput ()

virtual void	PrintHeader (std::ostream &os, Indent indent) const

bool	PrintObservers (std::ostream &os, Indent indent) const

void	PrintSelf (std::ostream &os, Indent indent) const

virtual void	PrintTrailer (std::ostream &os, Indent indent) const

virtual void	PropagateResetPipeline ()

virtual void	PushBackInput (const DataObject *input)

virtual void	PushFrontInput (const DataObject *input)

virtual void	ReleaseInputs ()

virtual void	RemoveInput (DataObject *input)

virtual void	RemoveOutput (DataObject *output)

virtual void	RestoreInputReleaseDataFlags ()

virtual void	SetNthInput (unsigned int num, DataObject *input)

virtual void	SetNthOutput (unsigned int num, DataObject *output)

void	SetNumberOfInputs (unsigned int num)

void	SetNumberOfOutputs (unsigned int num)

virtual void	SetNumberOfRequiredInputs (unsigned int _arg)

virtual void	SetNumberOfRequiredOutputs (unsigned int _arg)

Protected Attributes
TimeStamp	m_OutputInformationMTime

InternalReferenceCountType	m_ReferenceCount

SimpleFastMutexLock	m_ReferenceCountLock

bool	m_Updating

Private Member Functions
void	Advance ()

void	ComputeDt ()

void	ComputeNormals ()

void	ComputeOutput ()

void	GradientFit ()

void	Initialize ()

void	PotentialFit ()

void	SetDefaultStiffnessMatrix ()

void	SetMeshStiffness ()

Private Attributes
InputMeshPointer	m_Derives

InputMeshPointer	m_Displacements

InputMeshPointer	m_Forces

GradientImagePointer	m_Gradient

PixelType	m_GradientMagnitude

int	m_ImageDepth

int	m_ImageHeight

int	m_ImageWidth

StiffnessMatrixRawPointer *	m_K

InputMeshPointer	m_Locations

unsigned short	m_ModelXDownLimit

unsigned short	m_ModelXUpLimit

unsigned short	m_ModelYDownLimit

unsigned short	m_ModelYUpLimit

unsigned short	m_ModelZDownLimit

unsigned short	m_ModelZUpLimit

InputMeshPointer	m_Normals

int	m_NumberOfCells

int	m_NumberOfNodes

unsigned char	m_ObjectLabel

PotentialImageType::Pointer	m_Potential

PixelType	m_PotentialMagnitude

unsigned short	m_PotentialOn

double3DVector	m_Scale

int	m_Step

int	m_StepThreshold

double2DVector	m_Stiffness

StiffnessMatrixType	m_StiffnessMatrix [10]

double	m_TimeStep

Detailed Description

template<class TInputMesh, class TOutputMesh>
class itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >

Definition at line 56 of file itkDeformableMesh3DFilter.h.

Member Typedef Documentation

template<class TInputMesh , class TOutputMesh >

typedef InputMeshType::CellTraits itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::CellTraits

Definition at line 118 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef InputMeshType::CellType itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::CellType

Other definitions.

Definition at line 117 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef SmartPointer<const Self> itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::ConstPointer

Definition at line 67 of file itkDeformableMesh3DFilter.h.

template<class TOutputMesh>

typedef DataObject::Pointer itk::MeshSource< TOutputMesh >::DataObjectPointer

inherited

Some convenient typedefs.

Definition at line 56 of file itkMeshSource.h.

typedef std::vector<DataObjectPointer> itk::ProcessObject::DataObjectPointerArray

inherited

STL Array of SmartPointers to DataObjects

Definition at line 103 of file itkProcessObject.h.

typedef DataObjectPointerArray::size_type itk::ProcessObject::DataObjectPointerArraySizeType

inherited

Size type of an std::vector

Definition at line 112 of file itkProcessObject.h.

template<class TInputMesh , class TOutputMesh >

typedef CovariantVector<double, 2> itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::double2DVector

Definition at line 135 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef CovariantVector<double, 3> itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::double3DVector

Definition at line 136 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef GradientImageType::Pointer itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::GradientImagePointer

Definition at line 142 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef Image<GradientType, 3> itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::GradientImageType

Definition at line 126 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef ImageRegionIterator<GradientImageType> itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::GradientIterator

Definition at line 127 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef CovariantVector<PixelType, 3> itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::GradientType

Definition at line 125 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef GradientImageType::IndexType itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::ImageIndexType

Definition at line 129 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef GradientImageType::SizeType itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::ImageSizeType

Definition at line 128 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef InputMeshType::CellDataContainer::ConstIterator itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::InputCellDataContainerConstIterator

Definition at line 104 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef InputMeshType::CellDataContainerConstPointer itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::InputCellDataContainerConstPointer

Definition at line 102 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef InputMeshType::CellDataContainer::Iterator itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::InputCellDataContainerIterator

Definition at line 100 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef InputMeshType::CellDataContainerPointer itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::InputCellDataContainerPointer

Definition at line 98 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef InputMeshType::CellsContainer::ConstIterator itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::InputCellsContainerConstIterator

Definition at line 96 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef InputMeshType::CellsContainerConstPointer itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::InputCellsContainerConstPointer

Definition at line 94 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef InputMeshType::CellsContainer::Iterator itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::InputCellsContainerIterator

Definition at line 92 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef InputMeshType::CellsContainerPointer itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::InputCellsContainerPointer

Definition at line 90 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef InputMeshType::ConstPointer itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::InputMeshConstPointer

Definition at line 140 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef InputMeshType::Pointer itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::InputMeshPointer

Definition at line 139 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef TInputMesh itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::InputMeshType

Some typedefs.

Definition at line 73 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef InputMeshType::PointDataContainer::Iterator itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::InputPointDataContainerIterator

Definition at line 88 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef InputMeshType::PointDataContainerPointer itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::InputPointDataContainerPointer

Definition at line 86 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef InputMeshType::PointsContainer::ConstIterator itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::InputPointsContainerConstIterator

Definition at line 84 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef InputMeshType::PointsContainerConstPointer itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::InputPointsContainerConstPointer

Definition at line 80 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef InputMeshType::PointsContainer::Iterator itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::InputPointsContainerIterator

Definition at line 82 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef InputMeshType::PointsContainerPointer itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::InputPointsContainerPointer

Definition at line 78 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef InputMeshType::PointType itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::InputPointType

Definition at line 119 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef CovariantVector<int, 3> itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::int3DVector

Definition at line 134 of file itkDeformableMesh3DFilter.h.

typedef int itk::LightObject::InternalReferenceCountType

protectedinherited

Define the type of the reference count according to the target. This allows the use of atomic operations

Definition at line 137 of file itkLightObject.h.

template<class TInputMesh , class TOutputMesh >

typedef OutputMeshType::CellsContainer itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::OutputCellsContainer

Definition at line 110 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef OutputMeshType::CellsContainerPointer itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::OutputCellsContainerPointer

Definition at line 112 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef OutputMeshType::Pointer itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::OutputMeshPointer

Definition at line 141 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef TOutputMesh itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::OutputMeshType

Definition at line 106 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef OutputMeshType::PointsContainer::Iterator itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::OutputPointsContainerIterator

Definition at line 114 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef OutputMeshType::PointsContainerPointer itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::OutputPointsContainerPointer

Definition at line 108 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef InputMeshType::PixelType itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::PixelType

Definition at line 120 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef SmartPointer<Self> itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::Pointer

Smart pointer typedef support

Definition at line 66 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef Image<unsigned char, 3> itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::PotentialImageType

Image and Image iterator definition.

Definition at line 123 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef ImageRegionIterator<PotentialImageType> itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::PotentialIterator

Definition at line 124 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef DeformableMesh3DFilter itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::Self

Standard "Self" typedef.

Definition at line 60 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef StiffnessMatrixType* itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::StiffnessMatrixRawPointer

Definition at line 146 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef vnl_matrix_fixed<double, 4, 4> itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::StiffnessMatrixType

Definition at line 145 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef MeshToMeshFilter<TInputMesh, TOutputMesh> itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::Superclass

Standard "Superclass" typedef.

Definition at line 63 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef itk::CellInterface<PixelType, CellTraits> itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::TCellInterface

Definition at line 131 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

typedef itk::TriangleCell<TCellInterface> itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::TriCell

Definition at line 132 of file itkDeformableMesh3DFilter.h.

Constructor & Destructor Documentation

template<typename TInputMesh , typename TOutputMesh >

itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::DeformableMesh3DFilter ( )

protected

Definition at line 32 of file itkDeformableMesh3DFilter.txx.

References itk::ProcessObject::SetNthOutput(), and itk::ProcessObject::SetNumberOfRequiredOutputs().

template<typename TInputMesh , typename TOutputMesh >

itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::~DeformableMesh3DFilter ( )

protected

Definition at line 56 of file itkDeformableMesh3DFilter.txx.

template<class TInputMesh , class TOutputMesh >

itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::DeformableMesh3DFilter ( const Self & )

inlineprotected

Definition at line 176 of file itkDeformableMesh3DFilter.h.

Member Function Documentation

virtual void itk::ProcessObject::AbortGenerateDataOff ( )

virtualinherited

virtual void itk::ProcessObject::AbortGenerateDataOn ( )

virtualinherited

Turn on and off the AbortGenerateData flag.

void itk::ProcessObject::AddInput ( DataObject * input )

protectedvirtualinherited

Adds an input to the first null position in the input list. Expands the list memory if necessary

Reimplemented in otb::ObjectDetectionClassifier< TInputImage, TOutputVectorData, TLabel, TFunctionPrecision, TCoordRep >, otb::DescriptorsListSampleGenerator< TInputImage, TVectorData, TListSample, TLabelListSample, TOutputPrecision, TCoordRep >, otb::PersistentDescriptorsListSampleGenerator< TInputImage, TVectorData, TFunctionType, TListSample, TLabelListSample >, and otb::PersistentObjectDetectionClassifier< TInputImage, TOutputVectorData, TLabel, TFunctionType >.

Definition at line 144 of file itkProcessObject.cxx.

unsigned long itk::Object::AddObserver	(	const EventObject &	event,
		Command *	cmd
	)

inherited

Allow people to add/remove/invoke observers (callbacks) to any ITK object. This is an implementation of the subject/observer design pattern. An observer is added by specifying an event to respond to and an itk::Command to execute. It returns an unsigned long tag which can be used later to remove the event or retrieve the command. The memory for the Command becomes the responsibility of this object, so don't pass the same instance of a command to two different objects

Definition at line 389 of file itkObject.cxx.

References itk::SubjectImplementation::AddObserver().

Referenced by otb::StreamingImageVirtualWriter< TInputImage >::GenerateData(), itk::ProgressAccumulator::RegisterInternalFilter(), otb::ImageFileWriter< TInputImage >::Update(), and otb::WriterWatcherBase::WriterWatcherBase().

unsigned long itk::Object::AddObserver	(	const EventObject &	event,
		Command *	cmd
	)		const

inherited

Definition at line 401 of file itkObject.cxx.

References itk::SubjectImplementation::AddObserver().

void itk::ProcessObject::AddOutput ( DataObject * output )

protectedvirtualinherited

Adds an output to the first null position in the output list. Expands the list memory if necessary

Definition at line 390 of file itkProcessObject.cxx.

References itk::DataObject::ConnectSource().

template<typename TInputMesh , typename TOutputMesh >

void itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::Advance ( )

private

Update the displacements using d_{new} = d_{old} + timestep*d'.

do not update the displacements if the nodes is moving out of the image region.

Definition at line 411 of file itkDeformableMesh3DFilter.txx.

void itk::LightObject::BreakOnError ( )

staticinherited

This method is called when itkExceptionMacro executes. It allows the debugger to break on error.

Definition at line 149 of file itkLightObject.cxx.

void itk::ProcessObject::CacheInputReleaseDataFlags ( )

protectedvirtualinherited

Cache the state of any ReleaseDataFlag's on the inputs. While the filter is executing, we need to set the ReleaseDataFlag's on the inputs to false in case the current filter is implemented using a mini-pipeline (which will try to release the inputs). After the filter finishes, we restore the state of the ReleaseDataFlag's before the call to ReleaseInputs().

Definition at line 1050 of file itkProcessObject.cxx.

template<typename TInputMesh , typename TOutputMesh >

void itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::ComputeDt ( )

private

Definition at line 302 of file itkDeformableMesh3DFilter.txx.

template<typename TInputMesh , typename TOutputMesh >

void itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::ComputeNormals ( )

private

Definition at line 769 of file itkDeformableMesh3DFilter.txx.

template<typename TInputMesh , typename TOutputMesh >

void itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::ComputeOutput ( )

private

Definition at line 453 of file itkDeformableMesh3DFilter.txx.

template<class TInputMesh , class TOutputMesh >

void itk::MeshToMeshFilter< TInputMesh, TOutputMesh >::CopyInputMeshToOutputMeshCellData ( void )

protectedinherited

Definition at line 239 of file itkMeshToMeshFilter.txx.

template<class TInputMesh , class TOutputMesh >

void itk::MeshToMeshFilter< TInputMesh, TOutputMesh >::CopyInputMeshToOutputMeshCellLinks ( void )

protectedinherited

Definition at line 160 of file itkMeshToMeshFilter.txx.

template<class TInputMesh , class TOutputMesh >

void itk::MeshToMeshFilter< TInputMesh, TOutputMesh >::CopyInputMeshToOutputMeshCells ( void )

protectedinherited

Definition at line 195 of file itkMeshToMeshFilter.txx.

template<class TInputMesh , class TOutputMesh >

void itk::MeshToMeshFilter< TInputMesh, TOutputMesh >::CopyInputMeshToOutputMeshPointData ( void )

protectedinherited

Definition at line 125 of file itkMeshToMeshFilter.txx.

template<class TInputMesh , class TOutputMesh >

void itk::MeshToMeshFilter< TInputMesh, TOutputMesh >::CopyInputMeshToOutputMeshPoints ( void )

protectedinherited

Definition at line 90 of file itkMeshToMeshFilter.txx.

template<class TInputMesh , class TOutputMesh >

virtual::itk::LightObject::Pointer itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::CreateAnother ( void ) const

virtual

Create an object from an instance, potentially deferring to a factory. This method allows you to create an instance of an object that is exactly the same type as the referring object. This is useful in cases where an object has been cast back to a base class.

Reimplemented from itk::Object.

void itk::Object::DebugOff ( ) const

virtualinherited

Turn debugging output off.

Definition at line 253 of file itkObject.cxx.

void itk::Object::DebugOn ( ) const

virtualinherited

Turn debugging output on.

Definition at line 242 of file itkObject.cxx.

void itk::LightObject::Delete ( )

virtualinherited

Delete an itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C delete method will not work with reference counting.

Delete a itk object. This method should always be used to delete an object when the new operator was used to create it. Using the C++ delete method will not work with reference counting.

Definition at line 88 of file itkLightObject.cxx.

virtual void itk::ProcessObject::EnlargeOutputRequestedRegion ( DataObject * )

inlinevirtualinherited

Give the process object a chance to indictate that it will produce more output than it was requested to produce. For example, many imaging filters must compute the entire output at once or can only produce output in complete slices. Such filters cannot handle smaller requested regions. These filters must provide an implementation of this method, setting the output requested region to the size they will produce. By default, a process object does not modify the size of the output requested region.

Definition at line 224 of file itkProcessObject.h.

template<typename TInputMesh , typename TOutputMesh >

void itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::GenerateData ( void )

protectedvirtual

This method causes the filter to generate its output.

Reimplemented from itk::ProcessObject.

Definition at line 515 of file itkDeformableMesh3DFilter.txx.

template<class TOutputMesh >

void itk::MeshSource< TOutputMesh >::GenerateInputRequestedRegion ( void )

protectedvirtualinherited

Requested region of Mesh is specified as i of N unstructured regions. Since all DataObjects should be able to set the requested region in unstructured form, just copy output->RequestedRegion all inputs.

Reimplemented from itk::ProcessObject.

Definition at line 105 of file itkMeshSource.txx.

void itk::ProcessObject::GenerateOutputInformation ( void )

protectedvirtualinherited

Generate the information decribing the output data. The default implementation of this method will copy information from the input to the output. A filter may override this method if its output will have different information than its input. For instance, a filter that shrinks an image will need to provide an implementation for this method that changes the spacing of the pixels. Such filters should call their superclass' implementation of this method prior to changing the information values they need (i.e. GenerateOutputInformation() should call Superclass::GenerateOutputInformation() prior to changing the information.

Default implementation - copy information from first input to all outputs

Examples:: Fusion/BayesianFusionImageFilter.cxx.

Definition at line 1095 of file itkProcessObject.cxx.

Referenced by main().

void itk::ProcessObject::GenerateOutputRequestedRegion ( DataObject * output )

protectedvirtualinherited

Given one output whose requested region has been set, how should the requested regions for the remaining outputs of the process object be set? By default, all the outputs are set to the same requested region. If a filter needs to produce different requested regions for each output, for instance an image processing filter producing several outputs at different resolutions, then that filter may override this method and set the requested regions appropriatedly.

Note that a filter producing multiple outputs of different types is required to override this method. The default implementation can only correctly handle multiple outputs of the same type.

By default we set all the output requested regions to be the same.

Reimplemented in otb::watershed::Segmenter< TInputImage >, itk::watershed::Segmenter< TInputImage >, otb::watershed::Segmenter< InputImageType >, itk::watershed::Segmenter< InputImageType >, itk::watershed::SegmentTreeGenerator< TScalarType >, itk::watershed::SegmentTreeGenerator< ScalarType >, itk::MultiResolutionPyramidImageFilter< TInputImage, TOutputImage >, otb::watershed::Relabeler< TScalarType, TImageDimension >, itk::watershed::Relabeler< TScalarType, TImageDimension >, otb::watershed::Relabeler< ScalarType, itkGetStaticConstMacro(ImageDimension)>, itk::watershed::Relabeler< ScalarType, itkGetStaticConstMacro(ImageDimension)>, otb::watershed::BoundaryResolver< TPixelType, TDimension >, itk::watershed::BoundaryResolver< TPixelType, TDimension >, otb::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >, itk::watershed::EquivalenceRelabeler< TScalarType, TImageDimension >, and itk::RecursiveMultiResolutionPyramidImageFilter< TInputImage, TOutputImage >.

Definition at line 846 of file itkProcessObject.cxx.

virtual const bool& itk::ProcessObject::GetAbortGenerateData ( )

virtualinherited

Get the AbortGenerateData flag for the process object. Process objects may handle premature termination of execution in different ways.

Referenced by itk::ParallelSparseFieldLevelSetImageFilter< TInputImage, TOutputImage >::IterateThreaderCallback().

Command * itk::Object::GetCommand ( unsigned long tag )

inherited

Get the command associated with the given tag. NOTE: This returns a pointer to a Command, but it is safe to asign this to a Command::Pointer. Since Command inherits from LightObject, at this point in the code, only a pointer or a reference to the Command can be used.

Definition at line 414 of file itkObject.cxx.

References itk::Object::GetCommand(), and NULL.

Referenced by itk::Object::GetCommand().

bool itk::Object::GetDebug ( ) const

inherited

Get the value of the debug flag.

Definition at line 264 of file itkObject.cxx.

Referenced by otb::ogr::ImageReference< double >::GetDebug().

bool itk::Object::GetGlobalWarningDisplay ( )

staticinherited

Get the value of the global debug output control flag.

Definition at line 381 of file itkObject.cxx.

template<class TInputMesh , class TOutputMesh >

virtual GradientImagePointer itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::GetGradient ( ) const

virtual

template<class TInputMesh , class TOutputMesh >

const MeshToMeshFilter< TInputMesh, TOutputMesh >::InputMeshType * itk::MeshToMeshFilter< TInputMesh, TOutputMesh >::GetInput ( void ) const

inherited

Get the mesh input of this process object.

Definition at line 62 of file itkMeshToMeshFilter.txx.

References itk::ProcessObject::GetInput().

template<class TInputMesh , class TOutputMesh >

const MeshToMeshFilter< TInputMesh, TOutputMesh >::InputMeshType * itk::MeshToMeshFilter< TInputMesh, TOutputMesh >::GetInput ( unsigned int idx ) const

inherited

Definition at line 80 of file itkMeshToMeshFilter.txx.

References itk::ProcessObject::GetInput().

DataObject * itk::ProcessObject::GetInput ( unsigned int idx )

protectedinherited

Method used internally for getting an input.

Definition at line 470 of file itkProcessObject.cxx.

References NULL.

DataObjectPointerArray& itk::ProcessObject::GetInputs ( )

inlineinherited

Return an array with all the inputs of this process object. This is useful for tracing back in the pipeline to construct graphs etc.

Definition at line 108 of file itkProcessObject.h.

Referenced by otb::PipelineMemoryPrintCalculator::EvaluateProcessObjectPrintRecursive().

MetaDataDictionary & itk::Object::GetMetaDataDictionary ( void )

inherited

Returns: A reference to this objects MetaDataDictionary.

Warning: This reference may be changed.

Definition at line 532 of file itkObject.cxx.

References NULL.

const MetaDataDictionary & itk::Object::GetMetaDataDictionary ( void ) const

inherited

Returns: A constant reference to this objects MetaDataDictionary.

Definition at line 543 of file itkObject.cxx.

References NULL.

unsigned long itk::Object::GetMTime ( void ) const

virtualinherited

Return this objects modified time.

Return the modification for this object.

Definition at line 286 of file itkObject.cxx.

Referenced by itk::DeformationFieldSource< TOutputImage >::GetMTime(), itk::BoundingBox< TPointIdentifier, VPointDimension, TCoordRep, TPointsContainer >::GetMTime(), otb::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >::GetMTime(), itk::InverseDeformationFieldImageFilter< TInputImage, TOutputImage >::GetMTime(), itk::TransformToDeformationFieldSource< TOutputImage, TTransformPrecisionType >::GetMTime(), itk::VectorResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >::GetMTime(), itk::SpatialObject< TDimension >::GetMTime(), itk::ResampleImageFilter< TInputImage, TOutputImage, TInterpolatorPrecisionType >::GetMTime(), itk::SpatialObject< ::itk::GetMeshDimension< TMesh >::PointDimension >::GetObjectMTime(), otb::Function::NoStretchRenderingFunction< TPixel, TRGBPixel, TPixelRepresentationFunction, TTransferFunction >::Initialize(), otb::Function::StandardRenderingFunction< TPixel, TRGBPixel, TPixelRepresentationFunction, TTransferFunction >::Initialize(), itk::VTKImageExportBase::PipelineModifiedCallback(), and itk::ProcessObject::UpdateOutputInformation().

MultiThreader* itk::ProcessObject::GetMultiThreader ( )

inlineinherited

Return the multithreader used by this class.

Definition at line 280 of file itkProcessObject.h.

template<class TInputMesh , class TOutputMesh >

virtual const char* itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::GetNameOfClass ( ) const

virtual

Run-time type information (and related methods).

Reimplemented from itk::MeshToMeshFilter< TInputMesh, TOutputMesh >.

template<class TInputMesh , class TOutputMesh >

virtual InputMeshPointer itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::GetNormals ( ) const

virtual

DataObjectPointerArraySizeType itk::ProcessObject::GetNumberOfInputs ( ) const

inlineinherited

Get the size of the input vector. This is merely the size of the input vector, not the number of inputs that have valid DataObject's assigned. Use GetNumberOfValidRequiredInputs() to determine how many inputs are non-null.

Definition at line 118 of file itkProcessObject.h.

Referenced by otb::PipelineMemoryPrintCalculator::EvaluateProcessObjectPrintRecursive().

DataObjectPointerArraySizeType itk::ProcessObject::GetNumberOfOutputs ( ) const

inlineinherited

Definition at line 135 of file itkProcessObject.h.

Referenced by otb::PipelineMemoryPrintCalculator::EvaluateProcessObjectPrintRecursive().

virtual const unsigned int& itk::ProcessObject::GetNumberOfRequiredInputs ( )

protectedvirtualinherited

virtual const unsigned int& itk::ProcessObject::GetNumberOfRequiredOutputs ( )

protectedvirtualinherited

virtual const int& itk::ProcessObject::GetNumberOfThreads ( )

virtualinherited

Referenced by itk::BSplineScatteredDataPointSetToImageFilter< TInputPointSet, TOutputImage >::SplitRequestedRegion().

ProcessObject::DataObjectPointerArraySizeType itk::ProcessObject::GetNumberOfValidRequiredInputs ( ) const

virtualinherited

Get the number of valid inputs. This is the number of non-null entries in the input vector in the first NumberOfRequiredInputs slots. This method is used to determine whether the necessary required inputs have been set. Subclasses of ProcessObject may override this implementation if the required inputs are not the first slots in input vector.

Get the number of specified inputs

Reimplemented in itk::MultiResolutionPDEDeformableRegistration< TFixedImage, TMovingImage, TDeformationField, TRealType >, and itk::PDEDeformableRegistrationFilter< TFixedImage, TMovingImage, TDeformationField >.

Definition at line 112 of file itkProcessObject.cxx.

template<class TOutputMesh >

MeshSource< TOutputMesh >::OutputMeshType * itk::MeshSource< TOutputMesh >::GetOutput ( void )

inherited

Get the mesh output of this process object.

Definition at line 61 of file itkMeshSource.txx.

References itk::ProcessObject::GetOutput().

Referenced by itk::QuadEdgeMeshDiscretePrincipalCurvaturesEstimator< TInputMesh, TOutputMesh >::ComputeMeanAndGaussianCurvatures(), itk::QuadEdgeMeshDiscreteCurvatureEstimator< TInputMesh, TOutputMesh >::ComputeMixedArea(), itk::QuadEdgeMeshDiscreteMeanCurvatureEstimator< TInputMesh, TOutputMesh >::EstimateCurvature(), itk::QuadEdgeMeshDiscreteGaussianCurvatureEstimator< TInputMesh, TOutputMesh >::EstimateCurvature(), and itk::QuadEdgeMeshDiscreteCurvatureEstimator< TInputMesh, TOutputMesh >::GenerateData().

template<class TOutputMesh >

MeshSource< TOutputMesh >::OutputMeshType * itk::MeshSource< TOutputMesh >::GetOutput ( unsigned int idx )

inherited

Definition at line 79 of file itkMeshSource.txx.

References itk::ProcessObject::GetOutput().

const DataObject * itk::ProcessObject::GetOutput ( unsigned int idx ) const

protectedinherited

Definition at line 454 of file itkProcessObject.cxx.

References NULL.

DataObjectPointerArray& itk::ProcessObject::GetOutputs ( )

inlineinherited

Return an array with all the outputs of this process object. This is useful for tracing forward in the pipeline to contruct graphs etc.

Definition at line 133 of file itkProcessObject.h.

Referenced by otb::PipelineMemoryPrintCalculator::EvaluateProcessObjectPrintRecursive().

virtual const float& itk::ProcessObject::GetProgress ( )

virtualinherited

Get the execution progress of a process object. The progress is a floating number in [0,1] with 0 meaning no progress and 1 meaning the filter has completed execution.

Referenced by itk::WatershedMiniPipelineProgressCommand::Execute(), otb::StreamingImageVirtualWriter< TInputImage >::ObserveSourceFilterProgress(), otb::ImageFileWriter< TInputImage >::ObserveSourceFilterProgress(), itk::LaplacianRecursiveGaussianImageFilter< TInputImage, TOutputImage >::ReportProgress(), and itk::XMLFilterWatcher::ShowProgress().

virtual int itk::LightObject::GetReferenceCount ( ) const

inlinevirtualinherited

Gets the reference count on this object.

Definition at line 105 of file itkLightObject.h.

virtual const bool& itk::ProcessObject::GetReleaseDataBeforeUpdateFlag ( )

virtualinherited

bool itk::ProcessObject::GetReleaseDataFlag ( ) const

virtualinherited

Definition at line 512 of file itkProcessObject.cxx.

template<class TInputMesh , class TOutputMesh >

virtual int itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::GetStepThreshold ( ) const

virtual

template<class TInputMesh , class TOutputMesh >

virtual double2DVector itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::GetStiffness ( ) const

virtual

template<class TInputMesh , class TOutputMesh >

virtual double itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::GetTimeStep ( ) const

virtual

static void itk::Object::GlobalWarningDisplayOff ( )

inlinestaticinherited

Definition at line 100 of file itkObject.h.

References itk::Object::SetGlobalWarningDisplay().

Referenced by itk::OutputWindow::DisplayText(), itk::Win32OutputWindow::PromptText(), and itk::Win32OutputWindow::WndProc().

static void itk::Object::GlobalWarningDisplayOn ( )

inlinestaticinherited

Definition at line 98 of file itkObject.h.

References itk::Object::SetGlobalWarningDisplay().

template<typename TInputMesh , typename TOutputMesh >

void itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::GradientFit ( )

private

Fit the model using the gradient information.

Definition at line 663 of file itkDeformableMesh3DFilter.txx.

template<class TOutputMesh >

void itk::MeshSource< TOutputMesh >::GraftNthOutput	(	unsigned int	idx,
		DataObject *	output
	)

virtualinherited

Definition at line 129 of file itkMeshSource.txx.

References itk::DataObject::Graft().

template<class TOutputMesh >

void itk::MeshSource< TOutputMesh >::GraftOutput ( DataObject * output )

virtualinherited

Graft the specified DataObject onto this ProcessObject's output. This method grabs a handle to the specified DataObject's bulk data to used as its output's own bulk data. It also copies the region ivars (RequestedRegion, BufferedRegion, LargestPossibleRegion) and meta-data (Spacing, Origin) from the specified data object into this filter's output data object. Most importantly, however, it leaves the Source ivar untouched so the original pipeline routing is intact. This method is used when a process object is implemented using a mini-pipeline which is defined in its GenerateData() method. The usage is:

// setup the mini-pipeline to process the input to this filter
firstFilterInMiniPipeline->SetInput( this->GetInput() );
// setup the mini-pipeline to calculate the correct regions
// and write to the appropriate bulk data block
lastFilterInMiniPipeline->GraftOutput( this->GetOutput() );
// execute the mini-pipeline
lastFilterInMiniPipeline->Update();
// graft the mini-pipeline output back onto this filter's output.
// this is needed to get the appropriate regions passed back.
this->GraftOutput( lastFilterInMiniPipeline->GetOutput() );

For proper pipeline execution, a filter using a mini-pipeline must implement the GenerateInputRequestedRegion(), GenerateOutputRequestedRegion(), GenerateOutputInformation() and EnlargeOutputRequestedRegion() methods as necessary to reflect how the mini-pipeline will execute (in other words, the outer filter's pipeline mechanism must be consistent with what the mini-pipeline will do).

Definition at line 117 of file itkMeshSource.txx.

bool itk::Object::HasObserver ( const EventObject & event ) const

inherited

Return true if an observer is registered for this event.

Definition at line 467 of file itkObject.cxx.

template<typename TInputMesh , typename TOutputMesh >

void itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::Initialize ( void )

private

Definition at line 114 of file itkDeformableMesh3DFilter.txx.

References itk::Size< VDimension >::Fill(), and itk::Size< VDimension >::GetSize().

void itk::Object::InvokeEvent ( const EventObject & event )

inherited

Call Execute on all the Commands observing this event id.

Definition at line 446 of file itkObject.cxx.

Referenced by otb::Wrapper::Application::AddProcess(), itk::ParallelSparseFieldLevelSetImageFilter< TInputImage, TOutputImage >::IterateThreaderCallback(), and itk::VTKImageExportBase::UpdateDataCallback().

void itk::Object::InvokeEvent ( const EventObject & event ) const

inherited

Call Execute on all the Commands observing this event id. The actions triggered by this call doesn't modify this object.

Definition at line 457 of file itkObject.cxx.

template<class TOutputMesh >

MeshSource< TOutputMesh >::DataObjectPointer itk::MeshSource< TOutputMesh >::MakeOutput ( unsigned int idx )

virtualinherited

Make a DataObject of the correct type to used as the specified output. Every ProcessObject subclass must be able to create a DataObject that can be used as a specified output. This method is automatically called when DataObject::DisconnectPipeline() is called. DataObject::DisconnectPipeline, disconnects a data object from being an output of its current source. When the data object is disconnected, the ProcessObject needs to construct a replacement output data object so that the ProcessObject is in a valid state. So DataObject::DisconnectPipeline eventually calls ProcessObject::MakeOutput. Note that MakeOutput always returns a SmartPointer to a DataObject. If a subclass of MeshSource has multiple outputs of different types, then that class must provide an implementation of MakeOutput().

Reimplemented from itk::ProcessObject.

Reimplemented in itk::ImageToMeshFilter< TInputImage, TOutputMesh >.

Definition at line 50 of file itkMeshSource.txx.

void itk::Object::Modified ( void ) const

virtualinherited

Update the modification time for this object. Many filters rely on the modification time to determine if they need to recompute their data.

Make sure this object's modified time is greater than all others.

Definition at line 297 of file itkObject.cxx.

template<class TInputMesh , class TOutputMesh >

static Pointer itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::New ( )

static

Method of creation through the object factory.

template<class TInputMesh , class TOutputMesh >

void itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::operator= ( const Self & )

inlineprotected

Definition at line 177 of file itkDeformableMesh3DFilter.h.

void itk::ProcessObject::PopBackInput ( )

protectedvirtualinherited

Model a stack on the input list by providing a pop back

Definition at line 245 of file itkProcessObject.cxx.

Referenced by otb::JointMassOfBeliefFilter< TMassFunction >::PopBackInput(), and itk::ImageToImageFilter< TInputImage, TOutputImage >::PopBackInput().

void itk::ProcessObject::PopFrontInput ( )

protectedvirtualinherited

Definition at line 280 of file itkProcessObject.cxx.

Referenced by otb::JointMassOfBeliefFilter< TMassFunction >::PopFrontInput(), and itk::ImageToImageFilter< TInputImage, TOutputImage >::PopFrontInput().

template<typename TInputMesh , typename TOutputMesh >

void itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::PotentialFit ( )

private

compute the force given out by the binary mask.

Definition at line 548 of file itkDeformableMesh3DFilter.txx.

void itk::ProcessObject::PrepareOutputs ( )

virtualinherited

An opportunity to deallocate a ProcessObject's bulk data storage. Some filters may wish to reuse existing bulk data storage to avoid unnecessary deallocation/allocation sequences. The default implementation calls Initialize() on each output. DataObject::Initialize() frees its bulk data by default.

Reimplemented in itk::WatershedImageFilter< TInputImage >, otb::WatershedImageFilter< TInputImage >, and otb::GeometriesSource.

Definition at line 864 of file itkProcessObject.cxx.

void itk::LightObject::Print	(	std::ostream &	os,
		Indent	indent = `0`
	)		const

inherited

Cause the object to print itself out.

Avoid DLL boundary problems. This function will be common to all itk objects. It just calls the header/self/trailer virtual print methods, which can be overriden by subclasses (any itk object).

Definition at line 135 of file itkLightObject.cxx.

References itk::Indent::GetNextIndent().

Referenced by itk::operator<<().

void itk::LightObject::PrintHeader	(	std::ostream &	os,
		Indent	indent
	)		const

protectedvirtualinherited

Define a default print header for all objects.

Definition at line 320 of file itkLightObject.cxx.

bool itk::Object::PrintObservers	(	std::ostream &	os,
		Indent	indent
	)		const

protectedinherited

Definition at line 478 of file itkObject.cxx.

template<typename TInputMesh , typename TOutputMesh >

void itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::PrintSelf	(	std::ostream &	os,
		Indent	indent
	)		const

protectedvirtual

Methods invoked by Print() to print information about the object including superclasses. Typically not called by the user (use Print() instead) but used in the hierarchical print process to combine the output of several classes.

Chaining method to print an object's instance variables, as well as its superclasses.

Reimplemented from itk::Object.

Definition at line 70 of file itkDeformableMesh3DFilter.txx.

void itk::LightObject::PrintTrailer	(	std::ostream &	os,
		Indent	indent
	)		const

protectedvirtualinherited

Define a default print trailer for all objects.

Definition at line 331 of file itkLightObject.cxx.

void itk::ProcessObject::PropagateRequestedRegion ( DataObject * output )

virtualinherited

Send the requested region information back up the pipeline (to the filters that preceed this one).

check flag to avoid executing forever if there is a loop

Give the subclass a chance to indicate that it will provide more data then required for the output. This can happen, for example, when a source can only produce the whole output. Although this is being called for a specific output, the source may need to enlarge all outputs.

Give the subclass a chance to define how to set the requested regions for each of its outputs, given this output's requested region. The default implementation is to make all the output requested regions the same. A subclass may need to override this method if each output is a different resolution.

Give the subclass a chance to request a larger requested region on the inputs. This is necessary when, for example, a filter requires more data at the "internal" boundaries to produce the boundary values - such as an image filter that derives a new pixel value by applying some operation to a neighborhood of surrounding original values.

Now that we know the input requested region, propagate this through all the inputs.

Reimplemented in itk::VTKImageImport< TOutputImage >, and itk::StreamingImageFilter< TInputImage, TOutputImage >.

Definition at line 766 of file itkProcessObject.cxx.

void itk::ProcessObject::PropagateResetPipeline ( )

protectedvirtualinherited

Called to allocate the input array. Copies old inputs. Propagate a call to ResetPipeline() up the pipeline. Called only from DataObject.

Propagate the ResetPipeline call

Definition at line 631 of file itkProcessObject.cxx.

void itk::ProcessObject::PushBackInput ( const DataObject * input )

protectedvirtualinherited

Push/Pop an input of this process object. These methods allow a filter to model its input vector as a queue or stack. These routines may not be appropriate for all filters, especially filters with different types of inputs. These routines follow the semantics of STL.

Model a queue on the input list by providing a push back

Definition at line 234 of file itkProcessObject.cxx.

Referenced by otb::OGRDataSourceToLabelImageFilter< TOutputImage >::AddOGRDataSource(), otb::VectorDataToLabelImageFilter< TVectorData, TOutputImage >::AddVectorData(), otb::RasterizeVectorDataFilter< TVectorData, TInputImage, TOutputImage >::AddVectorData(), otb::JointMassOfBeliefFilter< TMassFunction >::PushBackInput(), and itk::ImageToImageFilter< TInputImage, TOutputImage >::PushBackInput().

void itk::ProcessObject::PushFrontInput ( const DataObject * input )

protectedvirtualinherited

Definition at line 259 of file itkProcessObject.cxx.

Referenced by otb::JointMassOfBeliefFilter< TMassFunction >::PushFrontInput(), and itk::ImageToImageFilter< TInputImage, TOutputImage >::PushFrontInput().

void itk::Object::Register ( ) const

virtualinherited

Increase the reference count (mark as used by another object).

Reimplemented from itk::LightObject.

Definition at line 309 of file itkObject.cxx.

Referenced by itk::ObjectFactoryBase::RegisterFactory().

virtual void itk::ProcessObject::ReleaseDataBeforeUpdateFlagOff ( )

virtualinherited

virtual void itk::ProcessObject::ReleaseDataBeforeUpdateFlagOn ( )

virtualinherited

void itk::ProcessObject::ReleaseDataFlagOff ( )

inlineinherited

Definition at line 256 of file itkProcessObject.h.

void itk::ProcessObject::ReleaseDataFlagOn ( )

inlineinherited

Definition at line 255 of file itkProcessObject.h.

void itk::ProcessObject::ReleaseInputs ( )

protectedvirtualinherited

A filter may need to release its input's bulk data after it has finished calculating a new output. The filter may need to release the inputs because the user has turned on the ReleaseDataFlag or it may need to release the inputs because the filter is an "in place" filter and it has overwritten its input with its output data. The implementation here simply checks the ReleaseDataFlag of the inputs. InPlaceImageFilter overrides this method so release the input it has overwritten.

See Also: InPlaceImageFilter::ReleaseInputs()

Definition at line 886 of file itkProcessObject.cxx.

Referenced by otb::LabelMapSVMClassifier< TInputLabelMap >::ReleaseInputs(), itk::InPlaceImageFilter< TInputImage, TOutputImage >::ReleaseInputs(), and itk::InPlaceLabelMapFilter< TInputImage >::ReleaseInputs().

void itk::Object::RemoveAllObservers ( )

inherited

Remove all observers .

Definition at line 435 of file itkObject.cxx.

void itk::ProcessObject::RemoveInput ( DataObject * input )

protectedvirtualinherited

Remove an input.

Removes the first occurence of the given OutputObject from the inputs to this ProcessObject. If it's the last object on the list, shortens the list.

Definition at line 173 of file itkProcessObject.cxx.

void itk::Object::RemoveObserver ( unsigned long tag )

inherited

Remove the observer with this tag value.

Definition at line 425 of file itkObject.cxx.

Referenced by otb::StreamingImageVirtualWriter< TInputImage >::GenerateData(), and otb::ImageFileWriter< TInputImage >::Update().

void itk::ProcessObject::RemoveOutput ( DataObject * output )

protectedvirtualinherited

Definition at line 294 of file itkProcessObject.cxx.

void itk::ProcessObject::ResetPipeline ( )

virtualinherited

Reset the pipeline. If an exception is thrown during an Update(), the pipeline may be in an inconsistent state. This method clears the internal state of the pipeline so Update() can be called.

Definition at line 621 of file itkProcessObject.cxx.

Referenced by itk::ParallelSparseFieldLevelSetImageFilter< TInputImage, TOutputImage >::IterateThreaderCallback().

void itk::ProcessObject::RestoreInputReleaseDataFlags ( )

protectedvirtualinherited

Restore the cached input ReleaseDataFlags.

Definition at line 1075 of file itkProcessObject.cxx.

virtual void itk::ProcessObject::SetAbortGenerateData ( bool _arg )

virtualinherited

Set the AbortGenerateData flag for the process object. Process objects may handle premature termination of execution in different ways.

void itk::Object::SetDebug ( bool debugFlag ) const

inherited

Set the value of the debug flag. A non-zero value turns debugging on.

Definition at line 275 of file itkObject.cxx.

template<typename TInputMesh , typename TOutputMesh >

void itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::SetDefaultStiffnessMatrix ( )

private

Definition at line 218 of file itkDeformableMesh3DFilter.txx.

void itk::Object::SetGlobalWarningDisplay ( bool val )

staticinherited

This is a global flag that controls whether any debug, warning or error messages are displayed.

Set the value of the global debug output control flag.

Definition at line 370 of file itkObject.cxx.

Referenced by itk::Object::GlobalWarningDisplayOff(), and itk::Object::GlobalWarningDisplayOn().

template<class TInputMesh , class TOutputMesh >

virtual void itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::SetGradient ( GradientImagePointer _arg )

virtual

Set/Get routines.

template<class TInputMesh , class TOutputMesh >

virtual void itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::SetGradientMagnitude ( PixelType _arg )

virtual

template<class TInputMesh , class TOutputMesh >

void itk::MeshToMeshFilter< TInputMesh, TOutputMesh >::SetInput ( const InputMeshType * input )

inherited

Set the mesh input of this process object.

Definition at line 48 of file itkMeshToMeshFilter.txx.

References itk::ProcessObject::SetNthInput().

template<typename TInputMesh , typename TOutputMesh >

void itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::SetMeshStiffness ( )

private

Set the stiffness matrix.

Definition at line 279 of file itkDeformableMesh3DFilter.txx.

void itk::Object::SetMetaDataDictionary ( const MetaDataDictionary & rhs )

inherited

Returns: Set the MetaDataDictionary

Definition at line 554 of file itkObject.cxx.

References NULL.

Referenced by otb::VectorImage< TPixel, VImageDimension >::CopyInformation(), and otb::Image< TPixel, VImageDimension >::CopyInformation().

void itk::ProcessObject::SetNthInput	(	unsigned int	idx,
		DataObject *	input
	)

protectedvirtualinherited

Protected methods for setting inputs. Subclasses make use of them for setting input.

Set an Input of this filter. This method does Register()/UnRegister() manually to deal with the fact that smart pointers aren't around to do the reference counting.

Reimplemented in itk::ImageToVectorImageFilter< TInputImage >.

Definition at line 210 of file itkProcessObject.cxx.

void itk::ProcessObject::SetNthOutput	(	unsigned int	idx,
		DataObject *	output
	)

protectedvirtualinherited

Protected methods for setting outputs. Subclasses make use of them for getting output.

Set an output of this filter. This method specifically does not do a Register()/UnRegister() because of the desire to break the reference counting loop.

Definition at line 333 of file itkProcessObject.cxx.

References itk::DataObject::ConnectSource().

void itk::ProcessObject::SetNumberOfInputs ( unsigned int num )

protectedinherited

Called to allocate the input array. Copies old inputs.

Called by constructor to set up input array.

Definition at line 96 of file itkProcessObject.cxx.

Referenced by otb::WaveletPacketTransform< TInputImage, TOutputImage, TFilter, Wavelet::FORWARD, TCost >::WaveletPacketTransform(), otb::WaveletPacketTransform< TInputImage, TOutputImage, TFilter, Wavelet::INVERSE, FullyDecomposedWaveletPacketCost< TInputImage > >::WaveletPacketTransform(), otb::WaveletTransform< TInputImage, TOutputImage, TFilter, Wavelet::FORWARD >::WaveletTransform(), and otb::WaveletTransform< TInputImage, TOutputImage, TFilter, Wavelet::INVERSE >::WaveletTransform().

void itk::ProcessObject::SetNumberOfOutputs ( unsigned int num )

protectedinherited

Called to allocate the output array. Copies old outputs.

Called by constructor to set up output array.

Definition at line 424 of file itkProcessObject.cxx.

Referenced by otb::MeanShiftSmoothingImageFilter< TInputImage, TOutputImage, TKernel, TOutputIterationImage >::MeanShiftSmoothingImageFilter(), otb::WaveletPacketTransform< TInputImage, TOutputImage, TFilter, Wavelet::FORWARD, TCost >::WaveletPacketTransform(), otb::WaveletPacketTransform< TInputImage, TOutputImage, TFilter, Wavelet::INVERSE, FullyDecomposedWaveletPacketCost< TInputImage > >::WaveletPacketTransform(), otb::WaveletTransform< TInputImage, TOutputImage, TFilter, Wavelet::FORWARD >::WaveletTransform(), and otb::WaveletTransform< TInputImage, TOutputImage, TFilter, Wavelet::INVERSE >::WaveletTransform().

virtual void itk::ProcessObject::SetNumberOfRequiredInputs ( unsigned int _arg )

protectedvirtualinherited

Referenced by itk::DeformableSimplexMesh3DFilter< TInputMesh, TOutputMesh >::DeformableSimplexMesh3DFilter(), itk::ExtensionVelocitiesImageFilter< TLevelSet, TAuxValue, VAuxDimension >::ExtensionVelocitiesImageFilter(), itk::FastMarchingImageFilter< TLevelSet, TSpeedImage >::FastMarchingImageFilter(), otb::FillGapsFilter::FillGapsFilter(), otb::ImageToLabelMapWithAttributesFilter< TInputImage, TLabeledImage, TLabel, TLabelObject >::ImageToLabelMapWithAttributesFilter(), itk::ImageToMeshFilter< TInputImage, TOutputMesh >::ImageToMeshFilter(), itk::PasteImageFilter< TInputImage, TSourceImage, TOutputImage >::PasteImageFilter(), otb::WaveletPacketTransform< TInputImage, TOutputImage, TFilter, Wavelet::FORWARD, TCost >::WaveletPacketTransform(), otb::WaveletPacketTransform< TInputImage, TOutputImage, TFilter, Wavelet::INVERSE, FullyDecomposedWaveletPacketCost< TInputImage > >::WaveletPacketTransform(), otb::WaveletTransform< TInputImage, TOutputImage, TFilter, Wavelet::FORWARD >::WaveletTransform(), and otb::WaveletTransform< TInputImage, TOutputImage, TFilter, Wavelet::INVERSE >::WaveletTransform().

virtual void itk::ProcessObject::SetNumberOfRequiredOutputs ( unsigned int _arg )

protectedvirtualinherited

Referenced by itk::AutomaticTopologyMeshSource< TOutputMesh >::AutomaticTopologyMeshSource(), itk::BalloonForceFilter< TInputMesh, TOutputMesh >::BalloonForceFilter(), itk::CoreAtomImageToDistanceMatrixProcess< TSourceImage >::CoreAtomImageToDistanceMatrixProcess(), itk::CoreAtomImageToUnaryCorrespondenceMatrixProcess< TSourceImage >::CoreAtomImageToUnaryCorrespondenceMatrixProcess(), itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::DeformableMesh3DFilter(), itk::DeformableSimplexMesh3DFilter< TInputMesh, TOutputMesh >::DeformableSimplexMesh3DFilter(), itk::ExtensionVelocitiesImageFilter< TLevelSet, TAuxValue, VAuxDimension >::ExtensionVelocitiesImageFilter(), itk::FastMarchingExtensionImageFilter< TLevelSet, TAuxValue, VAuxDimension, TSpeedImage >::FastMarchingExtensionImageFilter(), otb::FillGapsFilter::FillGapsFilter(), otb::GeometriesSource::GeometriesSource(), itk::ImageSource< TOutputImage >::ImageSource(), itk::ImageToMeshFilter< TInputImage, TOutputMesh >::ImageToMeshFilter(), itk::MedialNodePairCorrespondenceProcess< TSourceImage >::MedialNodePairCorrespondenceProcess(), itk::MedialNodeTripletCorrespondenceProcess< TSourceImage >::MedialNodeTripletCorrespondenceProcess(), itk::MeshSource< TOutputMesh >::MeshSource(), itk::MultiScaleHessianBasedMeasureImageFilter< TInputImage, THessianImage, TOutputImage >::MultiScaleHessianBasedMeasureImageFilter(), otb::OSMDataToVectorDataGenerator::OSMDataToVectorDataGenerator(), itk::PathSource< TOutputPath >::PathSource(), itk::RegularSphereMeshSource< TOutputMesh >::RegularSphereMeshSource(), otb::watershed::Relabeler< TScalarType, TImageDimension >::Relabeler(), itk::watershed::Relabeler< TScalarType, TImageDimension >::Relabeler(), itk::SimplexMeshAdaptTopologyFilter< TInputMesh, TOutputMesh >::SimplexMeshAdaptTopologyFilter(), itk::SphereMeshSource< TOutputMesh >::SphereMeshSource(), itk::TriangleMeshToSimplexMeshFilter< TInputMesh, TOutputMesh >::TriangleMeshToSimplexMeshFilter(), itk::TwoOutputExampleImageFilter< TImage >::TwoOutputExampleImageFilter(), and itk::VTKPolyDataReader< TOutputMesh >::VTKPolyDataReader().

virtual void itk::ProcessObject::SetNumberOfThreads ( int _arg )

virtualinherited

Get/Set the number of threads to create when executing.

Referenced by itk::CannyEdgeDetectionImageFilter< TInputImage, TOutputImage >::Compute2ndDerivative(), itk::CannyEdgeDetectionImageFilter< TInputImage, TOutputImage >::Compute2ndDerivativePos(), and itk::FiniteDifferenceSparseImageFilter< TInputImageType, TSparseOutputImageType >::PrecalculateChange().

template<class TInputMesh , class TOutputMesh >

virtual void itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::SetObjectLabel ( unsigned char _arg )

virtual

template<class TOutputMesh>

void itk::MeshSource< TOutputMesh >::SetOutput ( TOutputMesh * output )

inherited

Set the mesh output of this process object. This call is slated to be removed from ITK. You should GraftOutput() and possible DataObject::DisconnectPipeline() to properly change the output.

Definition at line 92 of file itkMeshSource.txx.

References itk::ProcessObject::SetNthOutput().

template<class TInputMesh , class TOutputMesh >

virtual void itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::SetPotentialMagnitude ( PixelType _arg )

virtual

template<class TInputMesh , class TOutputMesh >

virtual void itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::SetPotentialOn ( unsigned short _arg )

virtual

virtual void itk::ProcessObject::SetProgress ( float _arg )

virtualinherited

Set the execution progress of a process object. The progress is a floating number in [0,1] with 0 meaning no progress and 1 meaning the filter has completed execution. The ProgressEvent is NOT invoked.

void itk::Object::SetReferenceCount ( int ref )

virtualinherited

Sets the reference count (use with care)

If there is a delete method, invoke it.

Reimplemented from itk::LightObject.

Definition at line 347 of file itkObject.cxx.

virtual void itk::ProcessObject::SetReleaseDataBeforeUpdateFlag ( bool _arg )

virtualinherited

Turn on/off the flags to control whether the bulk data belonging to the outputs of this ProcessObject are released/reallocated during an Update(). In limited memory scenarios, a user may want to force the elements of a pipeline to release any bulk data that is going to be regenerated anyway during an Update() in order to control peak memory allocation. Note that this flag is different from the ReleaseDataFlag. ReleaseDataFlag manages the deallocation of a ProcessObject's bulk output data once that data has been consumed by a downstream ProcessObject. The ReleaseDataBeforeUpdateFlag manages the deallocation/reallocation of bulk data during a pipeline update to control peak memory utilization. Default value is on.

void itk::ProcessObject::SetReleaseDataFlag ( bool flag )

virtualinherited

Turn on/off the flags to control whether the bulk data belonging to the outputs of this ProcessObject are released after being used by a downstream ProcessObject. Default value is off. Another options for controlling memory utilization is the ReleaseDataBeforeUpdateFlag.

Definition at line 528 of file itkProcessObject.cxx.

template<class TInputMesh , class TOutputMesh >

virtual void itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::SetScale ( double3DVector _arg )

virtual

template<class TInputMesh , class TOutputMesh >

virtual void itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::SetStepThreshold ( int _arg )

virtual

template<class TInputMesh , class TOutputMesh >

virtual void itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::SetStiffness ( double2DVector _arg )

virtual

template<typename TInputMesh , typename TOutputMesh >

void itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::SetStiffnessMatrix	(	StiffnessMatrixType *	stiff,
		int	i
	)

Routines.

Set the stiffness matrix.

Definition at line 255 of file itkDeformableMesh3DFilter.txx.

template<class TInputMesh , class TOutputMesh >

virtual void itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::SetTimeStep ( double _arg )

virtual

void itk::Object::UnRegister ( ) const

virtualinherited

Decrease the reference count (release by another object).

If there is a delete method, invoke it.

Reimplemented from itk::LightObject.

Definition at line 324 of file itkObject.cxx.

Referenced by itk::Object::New(), and itk::ObjectFactoryBase::UnRegisterFactory().

void itk::ProcessObject::Update ( void )

virtualinherited

Bring this filter up-to-date. Update() checks modified times against last execution times, and re-executes objects if necessary. A side effect of this method is that the whole pipeline may execute in order to bring this filter up-to-date. This method updates the currently prescribed requested region. If no requested region has been set on the output, then the requested region will be set to the largest possible region. Once the requested region is set, Update() will make sure the specified requested region is up-to-date. This is a confusing side effect to users who are just calling Update() on a filter. A first call to Update() will cause the largest possible region to be updated. A second call to Update() will update that same region. If a modification to the upstream pipeline cause a filter to have a different largest possible region, this second call to Update() will not cause the output requested region to be reset to the new largest possible region. Instead, the output requested region will be the same as the last time Update() was called. To have a filter always to produce its largest possible region, users should call UpdateLargestPossibleRegion() instead.

The following methods are used to coordinate the execution of the data processing pipeline.

Definition at line 611 of file itkProcessObject.cxx.

Referenced by otb::ImageSeriesFileReader< Image< TPixel, 2 >, Image< TInternalPixel, 2 > >::GenerateData(), otb::ImageSeriesFileReader< Image< TPixel, 2 >, VectorImage< TInternalPixel, 2 > >::GenerateData(), otb::ImageSeriesFileReader< VectorImage< TPixel, 2 >, VectorImage< TInternalPixel, 2 > >::GenerateData(), itk::AutoCropLabelMapFilter< TInputImage >::GenerateOutputInformation(), itk::LabelMapMaskImageFilter< TInputImage, TOutputImage >::GenerateOutputInformation(), and itk::VoronoiSegmentationImageFilterBase< TInputImage, TOutputImage, TBinaryPriorImage >::RunSegmentOneStep().

void itk::ProcessObject::UpdateLargestPossibleRegion ( )

virtualinherited

Like Update(), but sets the output requested region to the largest possible region for the output. This is the method users should call if they want the entire dataset to be processed. If a user wants to update the same output region as a previous call to Update() or a previous call to UpdateLargestPossibleRegion(), then they should call the method Update().

Definition at line 1120 of file itkProcessObject.cxx.

void itk::ProcessObject::UpdateOutputData ( DataObject * output )

virtualinherited

Actually generate new output

prevent chasing our tail

Prepare all the outputs. This may deallocate previous bulk data.

Propagate the update call - make sure everything we might rely on is up-to-date Must call PropagateRequestedRegion before UpdateOutputData if multiple inputs since they may lead back to the same data object.

Cache the state of any ReleaseDataFlag's on the inputs. While the filter is executing, we need to set the ReleaseDataFlag's on the inputs to false in case the current filter is implemented using a mini-pipeline (which will try to release the inputs). After the filter finishes, we restore the state of the ReleaseDataFlag's before the call to ReleaseInputs().

Tell all Observers that the filter is starting

GenerateData this object - we have not aborted yet, and our progress before we start to execute is 0.0.

Count the number of required inputs which have been assigned

If we ended due to aborting, push the progress up to 1.0 (since it probably didn't end there)

Notify end event observers

Now we have to mark the data as up to date.

Restore the state of any input ReleaseDataFlags

Release any inputs if marked for release

Reimplemented in itk::StreamingImageFilter< TInputImage, TOutputImage >.

Definition at line 908 of file itkProcessObject.cxx.

void itk::ProcessObject::UpdateOutputInformation ( void )

virtualinherited

Update the information decribing the output data. This method transverses up the pipeline gathering modified time information. On the way back down the pipeline, this method calls GenerateOutputInformation() to set any necessary information about the output data objects. For instance, a filter that shrinks an image will need to provide an implementation for GenerateOutputInformation() that changes the spacing of the pixels. Such filters should call their superclass' implementation of GenerateOutputInformation prior to changing the information values they need (i.e. GenerateOutputInformation() should call Superclass::GenerateOutputInformation() prior to changing the information.

Watch out for loops in the pipeline

Since we are in a loop, we will want to update. But if we don't modify this filter, then we will not execute because our OutputInformationMTime will be more recent than the MTime of our output.

We now wish to set the PipelineMTime of each output DataObject to the largest of this ProcessObject's MTime, all input DataObject's PipelineMTime, and all input's MTime. We begin with the MTime of this ProcessObject.

Loop through the inputs

Propagate the UpdateOutputInformation call

What is the PipelineMTime of this input? Compare this against our current computation to find the largest one.

Pipeline MTime of the input does not include the MTime of the data object itself. Factor these mtimes into the next PipelineMTime

Call GenerateOutputInformation for subclass specific information. Since UpdateOutputInformation propagates all the way up the pipeline, we need to be careful here to call GenerateOutputInformation only if necessary. Otherwise, we may cause this source to be modified which will cause it to execute again on the next update.

Keep track of the last time GenerateOutputInformation() was called

Reimplemented in otb::watershed::Segmenter< TInputImage >, itk::watershed::Segmenter< TInputImage >, otb::watershed::Segmenter< InputImageType >, itk::watershed::Segmenter< InputImageType >, and itk::VTKImageImport< TOutputImage >.

Definition at line 664 of file itkProcessObject.cxx.

References itk::Object::GetMTime(), itk::DataObject::GetPipelineMTime(), itk::DataObject::SetPipelineMTime(), and itk::DataObject::UpdateOutputInformation().

Referenced by itk::VTKImageExportBase::UpdateInformationCallback().

void itk::ProcessObject::UpdateProgress ( float amount )

inherited

Update the progress of the process object.

Sets the Progress ivar to amount and invokes any observers for the ProgressEvent. The parameter amount should be in [0,1] and is the cumulative (not incremental) progress.

Update the progress of the process object. If a ProgressMethod exists, execute it. Then set the Progress ivar to amount. The parameter amount should range between (0,1).

Definition at line 500 of file itkProcessObject.cxx.

Referenced by itk::WatershedMiniPipelineProgressCommand::Execute(), otb::otb_UpdateGDALProgress(), itk::ProgressReporter::ProgressReporter(), and itk::ProgressReporter::~ProgressReporter().

Member Data Documentation

template<class TInputMesh , class TOutputMesh >

InputMeshPointer itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_Derives

private

Definition at line 187 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

InputMeshPointer itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_Displacements

private

Definition at line 186 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

InputMeshPointer itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_Forces

private

Meshes for Forces,Displacement,Normals, etc.

Definition at line 184 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

GradientImagePointer itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_Gradient

private

To compute force derived from gradient data.

Definition at line 229 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

PixelType itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_GradientMagnitude

private

Definition at line 225 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

int itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_ImageDepth

private

Definition at line 214 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

int itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_ImageHeight

private

Image size

Definition at line 213 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

int itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_ImageWidth

private

Definition at line 212 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

StiffnessMatrixRawPointer* itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_K

private

Definition at line 202 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

InputMeshPointer itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_Locations

private

Definition at line 188 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

unsigned short itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_ModelXDownLimit

private

Definition at line 218 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

unsigned short itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_ModelXUpLimit

private

This threshold decides when to stop the model.

Definition at line 217 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

unsigned short itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_ModelYDownLimit

private

Definition at line 220 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

unsigned short itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_ModelYUpLimit

private

Definition at line 219 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

unsigned short itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_ModelZDownLimit

private

Definition at line 222 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

unsigned short itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_ModelZUpLimit

private

Definition at line 221 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

InputMeshPointer itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_Normals

private

Definition at line 185 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

int itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_NumberOfCells

private

Definition at line 211 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

int itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_NumberOfNodes

private

Number of iterations

Definition at line 210 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

unsigned char itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_ObjectLabel

private

Definition at line 224 of file itkDeformableMesh3DFilter.h.

TimeStamp itk::ProcessObject::m_OutputInformationMTime

protectedinherited

Time when GenerateOutputInformation was last called.

Definition at line 421 of file itkProcessObject.h.

template<class TInputMesh , class TOutputMesh >

PotentialImageType::Pointer itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_Potential

private

Definition at line 230 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

PixelType itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_PotentialMagnitude

private

Definition at line 226 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

unsigned short itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_PotentialOn

private

Definition at line 223 of file itkDeformableMesh3DFilter.h.

InternalReferenceCountType itk::LightObject::m_ReferenceCount

mutableprotectedinherited

Number of uses of this object by other objects.

Definition at line 141 of file itkLightObject.h.

SimpleFastMutexLock itk::LightObject::m_ReferenceCountLock

mutableprotectedinherited

Mutex lock to protect modification to the reference count

Definition at line 144 of file itkLightObject.h.

template<class TInputMesh , class TOutputMesh >

double3DVector itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_Scale

private

Time step of each iteration

Definition at line 207 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

int itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_Step

private

Definition at line 209 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

int itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_StepThreshold

private

Definition at line 215 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

double2DVector itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_Stiffness

private

Parameters definitions.

Definition at line 205 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

StiffnessMatrixType itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_StiffnessMatrix[10]

private

Three different kinds of stiffness matrix.

Definition at line 201 of file itkDeformableMesh3DFilter.h.

template<class TInputMesh , class TOutputMesh >

double itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >::m_TimeStep

private

Definition at line 206 of file itkDeformableMesh3DFilter.h.

bool itk::ProcessObject::m_Updating

protectedinherited

These ivars are made protected so filters like itkStreamingImageFilter can access them directly. This flag indicates when the pipeline is executing. It prevents infinite recursion when pipelines have loops.

Definition at line 418 of file itkProcessObject.h.

The documentation for this class was generated from the following files:

Public Types

Public Member Functions

Static Public Member Functions

Protected Types

Protected Member Functions

Protected Attributes

Private Member Functions

Private Attributes

Detailed Description

template<class TInputMesh, class TOutputMesh> class itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >

Member Typedef Documentation

Constructor & Destructor Documentation

Member Function Documentation

Member Data Documentation

template<class TInputMesh, class TOutputMesh>
class itk::DeformableMesh3DFilter< TInputMesh, TOutputMesh >